RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA1059246", tax_clade = "Bacteria candidate phyla" and tax_phylum = "candidate division WOR-3"

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tax_superkingdom 1

tax_phylum 1

  • candidate division WOR-3 · 2 ✖

tax_clade 1

  • Bacteria candidate phyla · 2 ✖

bioproject 1

  • PRJNA1059246 · 2 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
29972232 29972232 PRJNA1059246_P_NODE_58351_length_262_cov_1.629630_g57725_i0 PRJNA1059246 58351 262 1.62963 4.2696306 candidate division WOR-3 bacterium 2052148 Bacteria Bacteria 57.4 3.19e-7   NR MEO0073499.1 2052148 g57725 i0 43.5 0.709923664122137 62 33 68.7 1 83 262 96 157 MEO0073499.1 FlgD immunoglobulin-like domain containing protein [candidate division WOR-3 bacterium] diamond 186 57.4 1 Bacteria Bacteria candidate phyla   candidate division WOR-3         candidate division WOR-3 bacterium
31204011 31204011 PRJNA1059246_P_NODE_65095_length_248_cov_0.880000_g64469_i0 PRJNA1059246 65095 248 0.88 2.1824 candidate division WOR-3 bacterium 2052148 Bacteria Bacteria 145 2.18e-38   NR MEO0288976.1 2052148 g64469 i0 78 1.98387096774194 82 18 99.2 0 247 2 662 743 MEO0288976.1 DEAD/DEAH box helicase family protein [candidate division WOR-3 bacterium] diamond 492 145 1 Bacteria Bacteria candidate phyla   candidate division WOR-3         candidate division WOR-3 bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;