RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

4 rows where bioproject = "PRJNA1059246", tax_clade = "Bacteria candidate phyla" and tax_phylum = "Candidatus Binatota"

✎ View and edit SQL

This data as json, CSV (advanced)

tax_superkingdom 1

tax_phylum 1

  • Candidatus Binatota · 4 ✖

tax_clade 1

  • Bacteria candidate phyla · 4 ✖

bioproject 1

  • PRJNA1059246 · 4 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
20138029 20138029 PRJNA1059246_P_NODE_9856_length_768_cov_8.048921_g9318_i0 PRJNA1059246 9856 768 8.048921 61.81571328 Candidatus Binatia bacterium 2838779 Bacteria Bacteria 100 1.2800000000000001e-22   NR HSQ35968.1 2838779 g9318 i0 44 1.09375 134 73 52 2 421 23 15 147 HSQ35968.1 Hsp20/alpha crystallin family protein [Candidatus Binatia bacterium] diamond 840 100 1 Bacteria Bacteria candidate phyla   Candidatus Binatota Candidatus Binatia       Candidatus Binatia bacterium
29435125 29435125 PRJNA1059246_P_NODE_63430_length_249_cov_1.750000_g62804_i0 PRJNA1059246 63430 249 1.75 4.3575 Candidatus Binatia bacterium 2838779 Bacteria Bacteria 67.4 8.13e-11   NR MFB3060024.1 2838779 g62804 i0 54.4 1.63855421686747 68 30 81.9 1 209 6 510 576 MFB3060024.1 M1 family metallopeptidase [Candidatus Binatia bacterium] diamond 408 67.4 1 Bacteria Bacteria candidate phyla   Candidatus Binatota Candidatus Binatia       Candidatus Binatia bacterium
29530179 29530179 PRJNA1059246_P_NODE_45870_length_308_cov_1.310638_g45244_i0 PRJNA1059246 45870 308 1.310638 4.03676504 Candidatus Binatia bacterium 2838779 Bacteria Bacteria 99.8 2.06e-23   NR HEY8518108.1 2838779 g45244 i0 58.8 1.55844155844156 80 32 77.9 1 4 243 144 222 HEY8518108.1 dienelactone hydrolase family protein [Candidatus Binatia bacterium] diamond 480 99.8 1 Bacteria Bacteria candidate phyla   Candidatus Binatota Candidatus Binatia       Candidatus Binatia bacterium
30698865 30698865 PRJNA1059246_P_NODE_71274_length_242_cov_0.911243_g70648_i0 PRJNA1059246 71274 242 0.911243 2.20520806 Candidatus Binatia bacterium 2838779 Bacteria Bacteria 77.4 2.1e-14   NR HEX9143080.1 2838779 g70648 i0 54.5 3.27272727272727 66 25 81.8 1 2 199 47 107 HEX9143080.1 glutathione-disulfide reductase [Candidatus Binatia bacterium] diamond 792 77.4 1 Bacteria Bacteria candidate phyla   Candidatus Binatota Candidatus Binatia       Candidatus Binatia bacterium

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;