RNAquarium Metadata Server
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contig_metadata

3 rows where bioproject = "PRJNA1059246", tax_clade = "Bacteria candidate phyla" and tax_phylum = "Candidatus Altimarinota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Altimarinota · 3 ✖

tax_clade 1

  • Bacteria candidate phyla · 3 ✖

bioproject 1

  • PRJNA1059246 · 3 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
21853621 21853621 PRJNA1059246_P_NODE_14698_length_613_cov_1.462963_g14104_i0 PRJNA1059246 14698 613 1.462963 8.96796319 Candidatus Altimarinota bacterium 2044595 Bacteria Bacteria 282 6.87e-91   NR MDF2378969.1 2044595 g14104 i0 66.3 0.973898858075041 199 67 97.4 0 599 3 4 202 MDF2378969.1 adenylosuccinate synthase [Candidatus Altimarinota bacterium] diamond 597 282 1 Bacteria Bacteria candidate phyla   Candidatus Altimarinota         Candidatus Altimarinota bacterium
27477748 27477748 PRJNA1059246_P_NODE_30643_length_394_cov_17.495327_g30017_i0 PRJNA1059246 30643 394 17.495327 68.93158838 Candidatus Altimarinota bacterium 2044595 Bacteria Bacteria 47 8.16e-4   NR MFA5854692.1 2044595 g30017 i0 31.8 0.67005076142132 88 53 64.7 2 348 94 3 86 MFA5854692.1 hypothetical protein [Candidatus Altimarinota bacterium] diamond 264 47 1 Bacteria Bacteria candidate phyla   Candidatus Altimarinota         Candidatus Altimarinota bacterium
30983467 30983467 PRJNA1059246_P_NODE_62994_length_250_cov_0.870056_g62368_i0 PRJNA1059246 62994 250 0.870056 2.17514 Candidatus Altimarinota bacterium 2044595 Bacteria Bacteria 58.2 1.48e-7   NR MBP9718125.1 2044595 g62368 i0 40 0.78 65 37 78 1 230 36 445 507 MBP9718125.1 cation-transporting P-type ATPase [Candidatus Altimarinota bacterium] diamond 195 58.2 1 Bacteria Bacteria candidate phyla   Candidatus Altimarinota         Candidatus Altimarinota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;