RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA1057075" and tax_phylum = "Chloroflexota"

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tax_superkingdom 1

tax_phylum 1

  • Chloroflexota · 2 ✖

tax_kingdom 1

bioproject 1

  • PRJNA1057075 · 2 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27414877 27414877 PRJNA1057075_S_NODE_9723_length_159_cov_2.872727_g9624_i0 PRJNA1057075 9723 159 2.872727 4.56763593 Anaerolineales bacterium 2073117 Bacteria Bacteria 42.4 0.0158   NR HEY3310137.1 2073117 g9624 i0 52.5 3 40 18 73.6 1 33 149 25 64 HEY3310137.1 PxKF domain-containing protein [Anaerolineales bacterium] diamond 477 42.4 1 Bacteria   Bacillati Chloroflexota Anaerolineae Anaerolineales     Anaerolineales bacterium
29845788 29845788 PRJNA1057075_S_NODE_8991_length_164_cov_0.869565_g8892_i0 PRJNA1057075 8991 164 0.869565 1.4260866 Anaerolineae bacterium 2052143 Bacteria Bacteria 41.2 0.0452   NR MBN1262623.1 2052143 g8892 i0 43.1 0.932926829268293 51 21 82.3 2 157 23 346 394 MBN1262623.1 MFS transporter [Anaerolineae bacterium] diamond 153 41.2 1 Bacteria   Bacillati Chloroflexota Anaerolineae       Anaerolineae bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;