RNAquarium Metadata Server
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contig_metadata

7 rows where bioproject = "PRJNA1057075" and tax_phylum = "Ascomycota"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Ascomycota · 7 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA1057075 · 7 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
1011332 1011332 PRJNA1057075_S_NODE_1601_length_305_cov_5.835938_g1502_i0 PRJNA1057075 1601 305 5.835938 17.7996109 root 1 Root_unresolved Root_unresolved 52.8 0.028   NTclustered gi|2837842073|ref|XM_069420121.1| 89139 g1502 i0 100 0.19672131147541 28 0 9 0 31 58 2292 2265 Rasamsonia byssochlamydoides uncharacterized protein (VTN77DRAFT_41), partial mRNA blastn 60 52.8 1 Eukaryota Opisthokonta Fungi Ascomycota Eurotiomycetes Eurotiales Trichocomaceae Rasamsonia Rasamsonia byssochlamydoides
3562016 3562016 PRJNA1057075_S_NODE_863_length_367_cov_38221.251572_g764_i0 PRJNA1057075 863 367 38221.251572 140271.99326924 Ascomycota 4890 Fungi Fungi 542 1.6999999999999995e-149   NTclustered gi|1802567479|gb|MT000479.1| 45277 g764 i0 97.771 85.558583106267 314 7 86 0 50 363 315 2 Sarocladium kiliense strain LSU0027 large subunit ribosomal RNA gene, partial sequence blastn 31400 542 1 Eukaryota Opisthokonta Fungi Ascomycota Sordariomycetes Hypocreales Sarocladiaceae Sarocladium Sarocladium kiliense
16313748 16313748 PRJNA1057075_S_NODE_873_length_366_cov_28363.782334_g774_i0 PRJNA1057075 873 366 28363.782334 103811.44334244 Ascomycota 4890 Fungi Fungi 542 1.69e-149   NTclustered gi|1473258532|gb|MH871476.1| 5046 g774 i0 97.771 85.792349726776 314 7 86 0 49 362 364 51 Sarocladium strictum culture CBS:376.70M strain CBS 376.70M large subunit ribosomal RNA gene, partial sequence blastn 31400 547 0.990859232175503 Eukaryota Opisthokonta Fungi Ascomycota Sordariomycetes Hypocreales Sarocladiaceae Sarocladium Sarocladium strictum
19302307 19302307 PRJNA1057075_S_NODE_2796_length_254_cov_51176.985366_g2697_i0 PRJNA1057075 2796 254 51176.985366 129989.54282964 Trichoderma atroviride 63577 Fungi Fungi 86.1 2.27e-12   NTclustered gi|2749703766|ref|XM_014090103.2| 63577 g2697 i0 88 16.9173228346457 75 6 30 1 14 88 2269 2198 Trichoderma atroviride uncharacterized protein (TrAtP1_012533), partial mRNA blastn 4297 86.1 1 Eukaryota Opisthokonta Fungi Ascomycota Sordariomycetes Hypocreales Hypocreaceae Trichoderma Trichoderma atroviride
20137730 20137730 PRJNA1057075_S_NODE_1016_length_351_cov_339.536424_g917_i0 PRJNA1057075 1016 351 339.536424 1191.77284824 Ascomycota 4890 Fungi Fungi 529 1.2599999999999996e-145   NTclustered gi|1473258532|gb|MH871476.1| 5046 g917 i0 98.026 86.6096866096866 304 6 87 0 5 308 51 354 Sarocladium strictum culture CBS:376.70M strain CBS 376.70M large subunit ribosomal RNA gene, partial sequence blastn 30400 534 0.99063670411985 Eukaryota Opisthokonta Fungi Ascomycota Sordariomycetes Hypocreales Sarocladiaceae Sarocladium Sarocladium strictum
23128904 23128904 PRJNA1057075_S_NODE_5699_length_192_cov_4.860140_g5600_i0 PRJNA1057075 5699 192 4.86014 9.3314688 Wickerhamiella azyma 5488 Fungi Fungi 73.1 1.27e-8   NTclustered gi|1209454344|ref|NG_055326.1| 5488 g5600 i0 80.412 8.90104166666667 97 17 50 2 74 169 3041 2946 Wickerhamiella azyma NRRL Y-17067 28S rRNA, partial sequence; from TYPE material blastn 1709 73.1 1 Eukaryota Opisthokonta Fungi Ascomycota Dipodascomycetes Dipodascales Trichomonascaceae Wickerhamiella Wickerhamiella azyma
26869200 26869200 PRJNA1057075_S_NODE_7841_length_171_cov_1.122951_g7742_i0 PRJNA1057075 7841 171 1.122951 1.92024621 Teratosphaeriaceae 668547 Fungi Fungi 47 1.43e-4   NR WPH01937.1 150365 g7742 i0 88.5 3.19298245614035 26 3 45.6 0 3 80 106 131 WPH01937.1 60S ribosomal protein L32 [Acrodontium crateriforme] diamond 546 47.4 0.991561181434599 Eukaryota Opisthokonta Fungi Ascomycota Dothideomycetes Mycosphaerellales Teratosphaeriaceae Acrodontium Acrodontium crateriforme

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;