RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA1057075", tax_kingdom = "Metazoa" and tax_phylum = "Porifera"

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tax_superkingdom 1

tax_phylum 1

  • Porifera · 2 ✖

tax_kingdom 1

  • Metazoa · 2 ✖

tax_clade 1

bioproject 1

  • PRJNA1057075 · 2 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
13764681 13764681 PRJNA1057075_S_NODE_91_length_639_cov_3.067797_g55_i0 PRJNA1057075 91 639 3.067797 19.60322283 Demospongiae 6042 Porifera other_Eukaryota 137 1.7000000000000002e-27   NTclustered gi|2848920844|emb|OZ187551.1| 283539 g55 i0 81.714 23.4068857589984 175 23 27 7 52 222 2770 2939 Suberites sp. UCMPWC859 genome assembly, organelle: mitochondrion blastn 14957 137 1 Eukaryota Opisthokonta Metazoa Porifera Demospongiae Suberitida Suberitidae Suberites Suberites sp. UCMPWC859
16313740 16313740 PRJNA1057075_S_NODE_1393_length_318_cov_8.156134_g1294_i0 PRJNA1057075 1393 318 8.156134 25.93650612 Mycale 86015 Porifera other_Eukaryota 171 7.89e-38   NTclustered gi|514227091|gb|KC961671.1| 458504 g1294 i0 82.828 26.9591194968553 198 26 61 6 10 204 97 289 Mycale laxissima voucher UERJ4 16S ribosomal RNA gene, partial sequence; mitochondrial blastn 8573 171 1 Eukaryota Opisthokonta Metazoa Porifera Demospongiae Poecilosclerida Mycalidae Mycale Mycale laxissima

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;