contig_metadata
41 rows where bioproject = "PRJNA1054617" and tax_phylum = "Kitrinoviricota"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1011277 | 1011277 | PRJNA1054617_S_NODE_3181_length_291_cov_2.737903_g3093_i0 | PRJNA1054617 | 3181 | 291 | 2.737903 | 7.96729773 | Pestivirus | 11095 | Viruses | Viruses | 516 | 7.95e-142 | NTclustered | gi|1786707920|gb|MN188074.1| | 11099 | g3093 | i0 | 98.625 | 99.9759450171821 | 291 | 4 | 100 | 0 | 1 | 291 | 3207 | 3497 | Bovine viral diarrhea virus 1 strain PI285, complete genome | blastn | 29093 | 516 | 1 | Viruses | Orthornavirae | Kitrinoviricota | Flasuviricetes | Amarillovirales | Flaviviridae | Pestivirus | Pestivirus bovis | ||
| 1451158 | 1451158 | PRJNA1054617_S_NODE_542_length_556_cov_3.692008_g463_i0 | PRJNA1054617 | 542 | 556 | 3.692008 | 20.52756448 | Pestivirus bovis | 3052619 | Viruses | Viruses | 867 | 0 | NTclustered | gi|2666910701|gb|PP213451.1| | 981676 | g463 | i0 | 94.784 | 100 | 556 | 29 | 100 | 0 | 1 | 556 | 10103 | 9548 | Bovine viral diarrhea virus 1b strain BJ-11, complete genome | blastn | 55600 | 867 | 1 | Viruses | Orthornavirae | Kitrinoviricota | Flasuviricetes | Amarillovirales | Flaviviridae | Pestivirus | Pestivirus bovis | ||
| 1451167 | 1451167 | PRJNA1054617_S_NODE_702_length_503_cov_6.756522_g619_i0 | PRJNA1054617 | 702 | 503 | 6.756522 | 33.98530566 | Pestivirus bovis | 3052619 | Viruses | Viruses | 837 | 0 | NTclustered | gi|800924332|gb|KP941591.1| | 11099 | g619 | i0 | 96.806 | 99.8489065606362 | 501 | 16 | 99 | 0 | 3 | 503 | 1133 | 633 | Bovine viral diarrhea virus 1 strain USMARC-55925 polyprotein gene, complete cds | blastn | 50224 | 837 | 1 | Viruses | Orthornavirae | Kitrinoviricota | Flasuviricetes | Amarillovirales | Flaviviridae | Pestivirus | Pestivirus bovis | ||
| 4002958 | 4002958 | PRJNA1054617_S_NODE_2664_length_312_cov_3.182156_g2576_i0 | PRJNA1054617 | 2664 | 312 | 3.182156 | 9.92832672 | Pestivirus bovis | 3052619 | Viruses | Viruses | 483 | 8.729999999999998e-132 | NTclustered | gi|2127986396|gb|MW250798.1| | 11099 | g2576 | i0 | 94.551 | 92.1121794871795 | 312 | 17 | 100 | 0 | 1 | 312 | 886 | 575 | Bovine viral diarrhea virus 1 strain 62-2, complete genome | blastn | 28739 | 483 | 1 | Viruses | Orthornavirae | Kitrinoviricota | Flasuviricetes | Amarillovirales | Flaviviridae | Pestivirus | Pestivirus bovis | ||
| 4839300 | 4839300 | PRJNA1054617_S_NODE_84_length_1083_cov_5.002885_g50_i0 | PRJNA1054617 | 84 | 1083 | 5.002885 | 54.18124455 | Pestivirus | 11095 | Viruses | Viruses | 1727 | 0 | NTclustered | gi|575471150|gb|KF772785.1| | 11099 | g50 | i0 | 95.636 | 94.3047091412742 | 1077 | 46 | 99 | 1 | 1 | 1077 | 1144 | 69 | Bovine viral diarrhea virus 1 isolate CC13B, complete genome | blastn | 102132 | 1727 | 1 | Viruses | Orthornavirae | Kitrinoviricota | Flasuviricetes | Amarillovirales | Flaviviridae | Pestivirus | Pestivirus bovis | ||
| 5279249 | 5279249 | PRJNA1054617_S_NODE_4185_length_261_cov_2.321101_g4097_i0 | PRJNA1054617 | 4185 | 261 | 2.321101 | 6.05807361 | Pestivirus bovis | 3052619 | Viruses | Viruses | 477 | 3.3099999999999986e-130 | NTclustered | gi|800924332|gb|KP941591.1| | 11099 | g4097 | i0 | 99.617 | 99.904214559387 | 261 | 1 | 100 | 0 | 1 | 261 | 7451 | 7191 | Bovine viral diarrhea virus 1 strain USMARC-55925 polyprotein gene, complete cds | blastn | 26075 | 477 | 1 | Viruses | Orthornavirae | Kitrinoviricota | Flasuviricetes | Amarillovirales | Flaviviridae | Pestivirus | Pestivirus bovis | ||
| 6554415 | 6554415 | PRJNA1054617_S_NODE_1046_length_440_cov_1.914358_g959_i0 | PRJNA1054617 | 1046 | 440 | 1.914358 | 8.4231752 | Pestivirus bovis | 3052619 | Viruses | Viruses | 651 | 0 | NTclustered | gi|2419860348|dbj|LC727645.1| | 11099 | g959 | i0 | 95.782 | 96.8272727272727 | 403 | 17 | 92 | 0 | 38 | 440 | 11930 | 11528 | Bovine viral diarrhea virus 1 Tokachi-13 RNA, nearly complete genome | blastn | 42604 | 651 | 1 | Viruses | Orthornavirae | Kitrinoviricota | Flasuviricetes | Amarillovirales | Flaviviridae | Pestivirus | Pestivirus bovis | ||
| 7829103 | 7829103 | PRJNA1054617_S_NODE_2187_length_336_cov_2.494881_g2099_i0 | PRJNA1054617 | 2187 | 336 | 2.494881 | 8.38280016 | Pestivirus bovis | 3052619 | Viruses | Viruses | 542 | 1.54e-149 | NTclustered | gi|1129879735|gb|KX170235.1| | 11099 | g2099 | i0 | 95.821 | 99.9523809523809 | 335 | 14 | 99 | 0 | 2 | 336 | 220 | 554 | Bovine viral diarrhea virus 1 isolate V087 Erns gene, partial cds | blastn | 33584 | 542 | 1 | Viruses | Orthornavirae | Kitrinoviricota | Flasuviricetes | Amarillovirales | Flaviviridae | Pestivirus | Pestivirus bovis | ||
| 7829113 | 7829113 | PRJNA1054617_S_NODE_4487_length_253_cov_7.119048_g4399_i0 | PRJNA1054617 | 4487 | 253 | 7.119048 | 18.01119144 | Pestivirus bovis | 3052619 | Viruses | Viruses | 412 | 9.14e-111 | NTclustered | gi|2419860346|dbj|LC727644.1| | 11099 | g4399 | i0 | 96.047 | 101.079051383399 | 253 | 10 | 100 | 0 | 1 | 253 | 899 | 647 | Bovine viral diarrhea virus 1 Tokachi-8 RNA, nearly complete genome | blastn | 25573 | 412 | 1 | Viruses | Orthornavirae | Kitrinoviricota | Flasuviricetes | Amarillovirales | Flaviviridae | Pestivirus | Pestivirus bovis | ||
| 7829130 | 7829130 | PRJNA1054617_S_NODE_8727_length_194_cov_1.218543_g8639_i0 | PRJNA1054617 | 8727 | 194 | 1.218543 | 2.36397342 | Pestivirus bovis | 3052619 | Viruses | Viruses | 315 | 1.93e-81 | NTclustered | gi|2666910701|gb|PP213451.1| | 981676 | g8639 | i0 | 95.876 | 99.8762886597938 | 194 | 8 | 100 | 0 | 1 | 194 | 5223 | 5416 | Bovine viral diarrhea virus 1b strain BJ-11, complete genome | blastn | 19376 | 315 | 1 | Viruses | Orthornavirae | Kitrinoviricota | Flasuviricetes | Amarillovirales | Flaviviridae | Pestivirus | Pestivirus bovis | ||
| 8664417 | 8664417 | PRJNA1054617_S_NODE_1127_length_430_cov_4.922481_g1040_i0 | PRJNA1054617 | 1127 | 430 | 4.922481 | 21.1666683 | Pestivirus | 11095 | Viruses | Viruses | 739 | 0 | NTclustered | gi|800924328|gb|KP941589.1| | 11099 | g1040 | i0 | 97.674 | 99.993023255814 | 430 | 10 | 100 | 0 | 1 | 430 | 10622 | 10193 | Bovine viral diarrhea virus 1 strain USMARC-55923 polyprotein gene, complete cds | blastn | 42997 | 739 | 1 | Viruses | Orthornavirae | Kitrinoviricota | Flasuviricetes | Amarillovirales | Flaviviridae | Pestivirus | Pestivirus bovis | ||
| 8664419 | 8664419 | PRJNA1054617_S_NODE_11587_length_172_cov_2.186047_g11499_i0 | PRJNA1054617 | 11587 | 172 | 2.186047 | 3.76000084 | Pestivirus | 11095 | Viruses | Viruses | 279 | 6.08e-71 | NTclustered | gi|642594|gb|L35849.1|BVDP125B | 11099 | g11499 | i0 | 95.93 | 100 | 172 | 7 | 100 | 0 | 1 | 172 | 1039 | 868 | Bovine viral diarrhea virus (strain Draper) p125 gene, partial cds | blastn | 17200 | 279 | 1 | Viruses | Orthornavirae | Kitrinoviricota | Flasuviricetes | Amarillovirales | Flaviviridae | Pestivirus | Pestivirus bovis | ||
| 8664448 | 8664448 | PRJNA1054617_S_NODE_3927_length_268_cov_2.635556_g3839_i0 | PRJNA1054617 | 3927 | 268 | 2.635556 | 7.06329008 | Pestivirus | 11095 | Viruses | Viruses | 422 | 1.62e-113 | NTclustered | gi|1408941648|gb|MH379222.1| | 11099 | g3839 | i0 | 95.131 | 99.5223880597015 | 267 | 13 | 99 | 0 | 1 | 267 | 9634 | 9368 | Bovine viral diarrhea virus 1 isolate P2 polyprotein gene, partial cds | blastn | 26672 | 422 | 1 | Viruses | Orthornavirae | Kitrinoviricota | Flasuviricetes | Amarillovirales | Flaviviridae | Pestivirus | Pestivirus bovis | ||
| 9104108 | 9104108 | PRJNA1054617_S_NODE_14688_length_156_cov_1.628319_g14600_i0 | PRJNA1054617 | 14688 | 156 | 1.628319 | 2.54017764 | Pestivirus bovis | 3052619 | Viruses | Viruses | 283 | 4.1899999999999994e-72 | NTclustered | gi|800924332|gb|KP941591.1| | 11099 | g14600 | i0 | 99.359 | 17.0384615384615 | 156 | 1 | 100 | 0 | 1 | 156 | 8929 | 8774 | Bovine viral diarrhea virus 1 strain USMARC-55925 polyprotein gene, complete cds | blastn | 2658 | 283 | 1 | Viruses | Orthornavirae | Kitrinoviricota | Flasuviricetes | Amarillovirales | Flaviviridae | Pestivirus | Pestivirus bovis | ||
| 9104117 | 9104117 | PRJNA1054617_S_NODE_1588_length_377_cov_5.380240_g1500_i0 | PRJNA1054617 | 1588 | 377 | 5.38024 | 20.2835048 | Pestivirus bovis | 3052619 | Viruses | Viruses | 577 | 4.789999999999999e-160 | NTclustered | gi|1350888790|gb|KY852366.1| | 11099 | g1500 | i0 | 94.4 | 99.8302387267905 | 375 | 21 | 99 | 0 | 1 | 375 | 375 | 1 | Bovine viral diarrhea virus 1 isolate S1118 E2 glycoprotein gene, partial cds | blastn | 37636 | 577 | 1 | Viruses | Orthornavirae | Kitrinoviricota | Flasuviricetes | Amarillovirales | Flaviviridae | Pestivirus | Pestivirus bovis | ||
| 9104126 | 9104126 | PRJNA1054617_S_NODE_3328_length_286_cov_1.378601_g3240_i0 | PRJNA1054617 | 3328 | 286 | 1.378601 | 3.94279886 | Pestivirus bovis | 3052619 | Viruses | Viruses | 507 | 4.69e-139 | NTclustered | gi|800924332|gb|KP941591.1| | 11099 | g3240 | i0 | 98.601 | 99.986013986014 | 286 | 4 | 100 | 0 | 1 | 286 | 7461 | 7746 | Bovine viral diarrhea virus 1 strain USMARC-55925 polyprotein gene, complete cds | blastn | 28596 | 507 | 1 | Viruses | Orthornavirae | Kitrinoviricota | Flasuviricetes | Amarillovirales | Flaviviridae | Pestivirus | Pestivirus bovis | ||
| 9104135 | 9104135 | PRJNA1054617_S_NODE_5908_length_227_cov_2.315217_g5820_i0 | PRJNA1054617 | 5908 | 227 | 2.315217 | 5.25554259 | Pestivirus bovis | 3052619 | Viruses | Viruses | 370 | 4.91e-98 | NTclustered | gi|1786707920|gb|MN188074.1| | 11099 | g5820 | i0 | 96.035 | 99.9779735682819 | 227 | 9 | 100 | 0 | 1 | 227 | 4088 | 4314 | Bovine viral diarrhea virus 1 strain PI285, complete genome | blastn | 22695 | 370 | 1 | Viruses | Orthornavirae | Kitrinoviricota | Flasuviricetes | Amarillovirales | Flaviviridae | Pestivirus | Pestivirus bovis | ||
| 9104147 | 9104147 | PRJNA1054617_S_NODE_8808_length_193_cov_1.593333_g8720_i0 | PRJNA1054617 | 8808 | 193 | 1.593333 | 3.07513269 | Pestivirus bovis | 3052619 | Viruses | Viruses | 340 | 3.17e-89 | NTclustered | gi|800924332|gb|KP941591.1| | 11099 | g8720 | i0 | 98.446 | 99.3212435233161 | 193 | 3 | 100 | 0 | 1 | 193 | 5436 | 5628 | Bovine viral diarrhea virus 1 strain USMARC-55925 polyprotein gene, complete cds | blastn | 19169 | 340 | 1 | Viruses | Orthornavirae | Kitrinoviricota | Flasuviricetes | Amarillovirales | Flaviviridae | Pestivirus | Pestivirus bovis | ||
| 9939389 | 9939389 | PRJNA1054617_S_NODE_7688_length_204_cov_1.565217_g7600_i0 | PRJNA1054617 | 7688 | 204 | 1.565217 | 3.19304268 | Pestivirus | 11095 | Viruses | Viruses | 322 | 1.23e-83 | NTclustered | gi|2731951075|gb|PP770551.1| | 11099 | g7600 | i0 | 95.098 | 99.8088235294118 | 204 | 10 | 100 | 0 | 1 | 204 | 9110 | 8907 | Bovine viral diarrhea virus 1 isolate YN2-11/2023, complete genome | blastn | 20361 | 322 | 1 | Viruses | Orthornavirae | Kitrinoviricota | Flasuviricetes | Amarillovirales | Flaviviridae | Pestivirus | Pestivirus bovis | ||
| 9939393 | 9939393 | PRJNA1054617_S_NODE_8468_length_196_cov_2.379085_g8380_i0 | PRJNA1054617 | 8468 | 196 | 2.379085 | 4.6630066 | Pestivirus | 11095 | Viruses | Viruses | 291 | 3.3e-74 | NTclustered | gi|800924334|gb|KP941592.1| | 11099 | g8380 | i0 | 93.367 | 99.9948979591837 | 196 | 13 | 100 | 0 | 1 | 196 | 8765 | 8960 | Bovine viral diarrhea virus 1 strain USMARC-55926 polyprotein gene, complete cds | blastn | 19599 | 291 | 1 | Viruses | Orthornavirae | Kitrinoviricota | Flasuviricetes | Amarillovirales | Flaviviridae | Pestivirus | Pestivirus bovis | ||
| 11655065 | 11655065 | PRJNA1054617_S_NODE_4630_length_250_cov_2.144928_g4542_i0 | PRJNA1054617 | 4630 | 250 | 2.144928 | 5.36232 | Pestivirus bovis | 3052619 | Viruses | Viruses | 379 | 9.139999999999998e-101 | NTclustered | gi|2040746277|gb|MT654137.1| | 11099 | g4542 | i0 | 94 | 97.38 | 250 | 15 | 100 | 0 | 1 | 250 | 841 | 592 | Bovine viral diarrhea virus 1 strain 20-8536, complete genome | blastn | 24345 | 379 | 1 | Viruses | Orthornavirae | Kitrinoviricota | Flasuviricetes | Amarillovirales | Flaviviridae | Pestivirus | Pestivirus bovis | ||
| 12930219 | 12930219 | PRJNA1054617_S_NODE_12891_length_164_cov_1.900826_g12803_i0 | PRJNA1054617 | 12891 | 164 | 1.900826 | 3.11735464 | Pestivirus bovis | 3052619 | Viruses | Viruses | 265 | 1.6199999999999998e-66 | NTclustered | gi|1129879725|gb|KX170230.1| | 11099 | g12803 | i0 | 95.732 | 99.7987804878049 | 164 | 7 | 100 | 0 | 1 | 164 | 455 | 292 | Bovine viral diarrhea virus 1 isolate V070 Erns gene, partial cds | blastn | 16367 | 265 | 1 | Viruses | Orthornavirae | Kitrinoviricota | Flasuviricetes | Amarillovirales | Flaviviridae | Pestivirus | Pestivirus bovis | ||
| 12930236 | 12930236 | PRJNA1054617_S_NODE_6231_length_222_cov_2.938547_g6143_i0 | PRJNA1054617 | 6231 | 222 | 2.938547 | 6.52357434 | Pestivirus bovis | 3052619 | Viruses | Viruses | 394 | 2.839999999999999e-105 | NTclustered | gi|800924332|gb|KP941591.1| | 11099 | g6143 | i0 | 98.649 | 96.1621621621622 | 222 | 3 | 100 | 0 | 1 | 222 | 2589 | 2368 | Bovine viral diarrhea virus 1 strain USMARC-55925 polyprotein gene, complete cds | blastn | 21348 | 394 | 1 | Viruses | Orthornavirae | Kitrinoviricota | Flasuviricetes | Amarillovirales | Flaviviridae | Pestivirus | Pestivirus bovis | ||
| 12930243 | 12930243 | PRJNA1054617_S_NODE_7251_length_209_cov_1.385542_g7163_i0 | PRJNA1054617 | 7251 | 209 | 1.385542 | 2.89578278 | Pestivirus bovis | 3052619 | Viruses | Viruses | 339 | 1.26e-88 | NTclustered | gi|2127986396|gb|MW250798.1| | 11099 | g7163 | i0 | 96.135 | 99.311004784689 | 207 | 8 | 99 | 0 | 1 | 207 | 11206 | 11000 | Bovine viral diarrhea virus 1 strain 62-2, complete genome | blastn | 20756 | 339 | 1 | Viruses | Orthornavirae | Kitrinoviricota | Flasuviricetes | Amarillovirales | Flaviviridae | Pestivirus | Pestivirus bovis | ||
| 14205153 | 14205153 | PRJNA1054617_S_NODE_10652_length_178_cov_8.037037_g10564_i0 | PRJNA1054617 | 10652 | 178 | 8.037037 | 14.30592586 | Carlavirus latensdianthi | 3427766 | Viruses | Viruses | 56.5 | 0.001 | NTclustered | gi|1995060321|gb|MN450069.1| | 12164 | g10564 | i0 | 92.5 | 0.853932584269663 | 40 | 2 | 22 | 1 | 1 | 40 | 13 | 51 | Carnation latent virus isolate KL, complete genome | blastn | 152 | 56.5 | 1 | Viruses | Orthornavirae | Kitrinoviricota | Alsuviricetes | Tymovirales | Betaflexiviridae | Carlavirus | Carlavirus latensdianthi | ||
| 14205194 | 14205194 | PRJNA1054617_S_NODE_5212_length_239_cov_1.464286_g5124_i0 | PRJNA1054617 | 5212 | 239 | 1.464286 | 3.49964354 | Pestivirus bovis | 3052619 | Viruses | Viruses | 381 | 2.4099999999999995e-101 | NTclustered | gi|2127986396|gb|MW250798.1| | 11099 | g5124 | i0 | 95.397 | 76.6778242677824 | 239 | 11 | 100 | 0 | 1 | 239 | 10082 | 9844 | Bovine viral diarrhea virus 1 strain 62-2, complete genome | blastn | 18326 | 381 | 1 | Viruses | Orthornavirae | Kitrinoviricota | Flasuviricetes | Amarillovirales | Flaviviridae | Pestivirus | Pestivirus bovis | ||
| 15038903 | 15038903 | PRJNA1054617_S_NODE_14592_length_156_cov_2.849558_g14504_i0 | PRJNA1054617 | 14592 | 156 | 2.849558 | 4.44531048 | Pestivirus | 11095 | Viruses | Viruses | 278 | 1.95e-70 | NTclustered | gi|386285714|gb|JQ418635.1| | 54315 | g14504 | i0 | 98.718 | 98.7179487179487 | 156 | 2 | 100 | 0 | 1 | 156 | 321 | 476 | Bovine viral diarrhea virus 2 isolate 08Q723 polyprotein gene, complete cds | blastn | 15400 | 278 | 1 | Viruses | Orthornavirae | Kitrinoviricota | Flasuviricetes | Amarillovirales | Flaviviridae | Pestivirus | Pestivirus tauri | ||
| 15479313 | 15479313 | PRJNA1054617_S_NODE_1733_length_366_cov_2.130031_g1645_i0 | PRJNA1054617 | 1733 | 366 | 2.130031 | 7.79591346 | Pestivirus bovis | 3052619 | Viruses | Viruses | 593 | 4.599999999999998e-165 | NTclustered | gi|2040746277|gb|MT654137.1| | 11099 | g1645 | i0 | 95.902 | 99.3251366120219 | 366 | 15 | 100 | 0 | 1 | 366 | 1656 | 1291 | Bovine viral diarrhea virus 1 strain 20-8536, complete genome | blastn | 36353 | 593 | 1 | Viruses | Orthornavirae | Kitrinoviricota | Flasuviricetes | Amarillovirales | Flaviviridae | Pestivirus | Pestivirus bovis | ||
| 16753419 | 16753419 | PRJNA1054617_S_NODE_2174_length_337_cov_2.132653_g2086_i0 | PRJNA1054617 | 2174 | 337 | 2.132653 | 7.18704061 | Pestivirus bovis | 3052619 | Viruses | Viruses | 556 | 5.529999999999999e-154 | NTclustered | gi|800924332|gb|KP941591.1| | 11099 | g2086 | i0 | 96.439 | 99.9139465875371 | 337 | 12 | 100 | 0 | 1 | 337 | 2730 | 3066 | Bovine viral diarrhea virus 1 strain USMARC-55925 polyprotein gene, complete cds | blastn | 33671 | 556 | 1 | Viruses | Orthornavirae | Kitrinoviricota | Flasuviricetes | Amarillovirales | Flaviviridae | Pestivirus | Pestivirus bovis | ||
| 18028307 | 18028307 | PRJNA1054617_S_NODE_13375_length_162_cov_1.361345_g13287_i0 | PRJNA1054617 | 13375 | 162 | 1.361345 | 2.2053789 | Pestivirus bovis | 3052619 | Viruses | Viruses | 278 | 2.04e-70 | NTclustered | gi|323212|gb|M87808.1|BVDMSEQD | 11099 | g13287 | i0 | 97.531 | 99.8333333333333 | 162 | 4 | 100 | 0 | 1 | 162 | 253 | 92 | Bovine viral diarrhea virus mRNA sequence | blastn | 16173 | 278 | 1 | Viruses | Orthornavirae | Kitrinoviricota | Flasuviricetes | Amarillovirales | Flaviviridae | Pestivirus | Pestivirus bovis | ||
| 19302213 | 19302213 | PRJNA1054617_S_NODE_15096_length_154_cov_2.828829_g15008_i0 | PRJNA1054617 | 15096 | 154 | 2.828829 | 4.35639666 | Pestivirus bovis | 3052619 | Viruses | Viruses | 268 | 1.15e-67 | NTclustered | gi|2553477538|gb|OR004812.1| | 11099 | g15008 | i0 | 98.052 | 99.9545454545455 | 154 | 3 | 100 | 0 | 1 | 154 | 10057 | 9904 | Bovine viral diarrhea virus 1 isolate TJ2108, complete genome | blastn | 15393 | 268 | 1 | Viruses | Orthornavirae | Kitrinoviricota | Flasuviricetes | Amarillovirales | Flaviviridae | Pestivirus | Pestivirus bovis | ||
| 19302217 | 19302217 | PRJNA1054617_S_NODE_15456_length_153_cov_1.063636_g15368_i0 | PRJNA1054617 | 15456 | 153 | 1.063636 | 1.62736308 | Pestivirus bovis | 3052619 | Viruses | Viruses | 224 | 2.5099999999999998e-54 | NTclustered | gi|2040746277|gb|MT654137.1| | 11099 | g15368 | i0 | 94.483 | 16.6928104575163 | 145 | 8 | 95 | 0 | 9 | 153 | 9801 | 9945 | Bovine viral diarrhea virus 1 strain 20-8536, complete genome | blastn | 2554 | 224 | 1 | Viruses | Orthornavirae | Kitrinoviricota | Flasuviricetes | Amarillovirales | Flaviviridae | Pestivirus | Pestivirus bovis | ||
| 19302238 | 19302238 | PRJNA1054617_S_NODE_5416_length_235_cov_1.916667_g5328_i0 | PRJNA1054617 | 5416 | 235 | 1.916667 | 4.50416745 | Pestivirus bovis | 3052619 | Viruses | Viruses | 353 | 5.16e-93 | NTclustered | gi|2858850703|gb|PQ613785.1| | 11099 | g5328 | i0 | 93.671 | 73.2936170212766 | 237 | 13 | 100 | 1 | 1 | 235 | 4369 | 4605 | Bovine viral diarrhea virus 1 isolate USMARC/PI-90-21/CD46KO polyprotein gene, complete cds | blastn | 17224 | 353 | 1 | Viruses | Orthornavirae | Kitrinoviricota | Flasuviricetes | Amarillovirales | Flaviviridae | Pestivirus | Pestivirus bovis | ||
| 20577592 | 20577592 | PRJNA1054617_S_NODE_5477_length_234_cov_1.445026_g5389_i0 | PRJNA1054617 | 5477 | 234 | 1.445026 | 3.38136084 | Pestivirus bovis | 3052619 | Viruses | Viruses | 377 | 3.04e-100 | NTclustered | gi|806983200|gb|KP755885.1| | 11099 | g5389 | i0 | 95.726 | 100 | 234 | 10 | 100 | 0 | 1 | 234 | 486 | 253 | Bovine viral diarrhea virus 1 isolate PI2_Ileum_9 nonstructural protein NS5b gene, partial cds | blastn | 23400 | 377 | 1 | Viruses | Orthornavirae | Kitrinoviricota | Flasuviricetes | Amarillovirales | Flaviviridae | Pestivirus | Pestivirus bovis | ||
| 21853385 | 21853385 | PRJNA1054617_S_NODE_9238_length_189_cov_2.513699_g9150_i0 | PRJNA1054617 | 9238 | 189 | 2.513699 | 4.75089111 | Pestivirus bovis | 3052619 | Viruses | Viruses | 300 | 5.25e-77 | NTclustered | gi|1408941636|gb|MH311877.1| | 981676 | g9150 | i0 | 95.238 | 100 | 189 | 9 | 100 | 0 | 1 | 189 | 7096 | 6908 | Bovine viral diarrhea virus 1b isolate B4A d168 polyprotein gene, partial cds | blastn | 18900 | 300 | 1 | Viruses | Orthornavirae | Kitrinoviricota | Flasuviricetes | Amarillovirales | Flaviviridae | Pestivirus | Pestivirus bovis | ||
| 22688092 | 22688092 | PRJNA1054617_S_NODE_478_length_580_cov_5.230912_g401_i0 | PRJNA1054617 | 478 | 580 | 5.230912 | 30.3392896 | Pestivirus | 11095 | Viruses | Viruses | 913 | 0 | NTclustered | gi|2553477524|gb|OR004805.1| | 11099 | g401 | i0 | 95.156 | 99.8534482758621 | 578 | 28 | 99 | 0 | 1 | 578 | 1144 | 567 | Bovine viral diarrhea virus 1 isolate TJ2101, complete genome | blastn | 57915 | 917 | 0.995637949836423 | Viruses | Orthornavirae | Kitrinoviricota | Flasuviricetes | Amarillovirales | Flaviviridae | Pestivirus | Pestivirus bovis | ||
| 22688107 | 22688107 | PRJNA1054617_S_NODE_7678_length_204_cov_1.714286_g7590_i0 | PRJNA1054617 | 7678 | 204 | 1.714286 | 3.49714344 | Pestivirus | 11095 | Viruses | Viruses | 300 | 5.76e-77 | NTclustered | gi|2419860348|dbj|LC727645.1| | 11099 | g7590 | i0 | 93.137 | 99.6176470588235 | 204 | 14 | 100 | 0 | 1 | 204 | 3615 | 3818 | Bovine viral diarrhea virus 1 Tokachi-13 RNA, nearly complete genome | blastn | 20322 | 300 | 1 | Viruses | Orthornavirae | Kitrinoviricota | Flasuviricetes | Amarillovirales | Flaviviridae | Pestivirus | Pestivirus bovis | ||
| 23128798 | 23128798 | PRJNA1054617_S_NODE_14219_length_158_cov_1.600000_g14131_i0 | PRJNA1054617 | 14219 | 158 | 1.6 | 2.528 | Pestivirus bovis | 3052619 | Viruses | Viruses | 265 | 1.5399999999999998e-66 | NTclustered | gi|2040746277|gb|MT654137.1| | 11099 | g14131 | i0 | 96.835 | 99.8544303797468 | 158 | 5 | 100 | 0 | 1 | 158 | 477 | 634 | Bovine viral diarrhea virus 1 strain 20-8536, complete genome | blastn | 15777 | 265 | 1 | Viruses | Orthornavirae | Kitrinoviricota | Flasuviricetes | Amarillovirales | Flaviviridae | Pestivirus | Pestivirus bovis | ||
| 24402495 | 24402495 | PRJNA1054617_S_NODE_5160_length_240_cov_0.659898_g5072_i0 | PRJNA1054617 | 5160 | 240 | 0.659898 | 1.5837552 | Pestivirus bovis | 3052619 | Viruses | Viruses | 401 | 1.8599999999999994e-107 | NTclustered | gi|2419860346|dbj|LC727644.1| | 11099 | g5072 | i0 | 97.447 | 98.4083333333333 | 235 | 6 | 98 | 0 | 6 | 240 | 8063 | 7829 | Bovine viral diarrhea virus 1 Tokachi-8 RNA, nearly complete genome | blastn | 23618 | 401 | 1 | Viruses | Orthornavirae | Kitrinoviricota | Flasuviricetes | Amarillovirales | Flaviviridae | Pestivirus | Pestivirus bovis | ||
| 24402501 | 24402501 | PRJNA1054617_S_NODE_580_length_540_cov_4.557344_g499_i0 | PRJNA1054617 | 580 | 540 | 4.557344 | 24.6096576 | Pestivirus bovis | 3052619 | Viruses | Viruses | 798 | 0 | NTclustered | gi|2587731848|gb|OR620203.1| | 11099 | g499 | i0 | 93.785 | 99.7277777777778 | 531 | 33 | 98 | 0 | 4 | 534 | 577 | 47 | Bovine viral diarrhea virus 1 strain 2402UYSJ/2016, partial genome | blastn | 53853 | 798 | 1 | Viruses | Orthornavirae | Kitrinoviricota | Flasuviricetes | Amarillovirales | Flaviviridae | Pestivirus | Pestivirus bovis | ||
| 25237490 | 25237490 | PRJNA1054617_S_NODE_10980_length_176_cov_2.466165_g10892_i0 | PRJNA1054617 | 10980 | 176 | 2.466165 | 4.3404504 | Pestivirus | 11095 | Viruses | Viruses | 287 | 3.74e-73 | NTclustered | gi|6465859|emb|AJ238812.1| | 11099 | g10892 | i0 | 96.023 | 99.9772727272727 | 176 | 7 | 100 | 0 | 1 | 176 | 1700 | 1525 | pestivirus type 1 genomic RNA for E2, p7 genes and partial N2 gene, strain IDA | blastn | 17596 | 287 | 1 | Viruses | Orthornavirae | Kitrinoviricota | Flasuviricetes | Amarillovirales | Flaviviridae | Pestivirus | Pestivirus bovis |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;