contig_metadata
13 rows where bioproject = "PRJNA1054617" and tax_phylum = "Bacillota"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 4839306 | 4839306 | PRJNA1054617_S_NODE_9124_length_190_cov_2.503401_g9036_i0 | PRJNA1054617 | 9124 | 190 | 2.503401 | 4.7564619 | Anaerocolumna | 1843210 | Bacteria | Bacteria | 351 | 1.4399999999999997e-92 | NTclustered | gi|1886840841|dbj|AP023368.1| | 1727145 | g9036 | i0 | 100 | 456.136842105263 | 190 | 0 | 100 | 0 | 1 | 190 | 14715 | 14526 | Anaerocolumna chitinilytica DNA, complete genome | blastn | 86666 | 351 | 1 | Bacteria | Bacillati | Bacillota | Clostridia | Lachnospirales | Lachnospiraceae | Anaerocolumna | Anaerocolumna chitinilytica | ||
| 10379778 | 10379778 | PRJNA1054617_S_NODE_13789_length_160_cov_1.179487_g13701_i0 | PRJNA1054617 | 13789 | 160 | 1.179487 | 1.8871792 | Lacrimispora sp. HJ-01 | 3375704 | Bacteria | Bacteria | 296 | 5.55e-76 | NTclustered | gi|2852291485|gb|CP173277.1| | 3375704 | g13701 | i0 | 100 | 438.88125 | 160 | 0 | 100 | 0 | 1 | 160 | 4074131 | 4074290 | Lacrimispora sp. HJ-01 chromosome, complete genome | blastn | 70221 | 296 | 1 | Bacteria | Bacillati | Bacillota | Clostridia | Lachnospirales | Lachnospiraceae | Lacrimispora | Lacrimispora sp. HJ-01 | ||
| 12490127 | 12490127 | PRJNA1054617_S_NODE_15150_length_154_cov_1.657658_g15062_i0 | PRJNA1054617 | 15150 | 154 | 1.657658 | 2.55279332 | FCB group | 1783270 | Bacteria | Bacteria | 285 | 1.14e-72 | NTclustered | gi|2800799246|gb|CP093959.1| | 1358 | g15062 | i0 | 100 | 527 | 154 | 0 | 100 | 0 | 1 | 154 | 523180 | 523333 | Lactococcus lactis strain FAM 17919 chromosome, complete genome | blastn | 81158 | 285 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Lactobacillales | Streptococcaceae | Lactococcus | Lactococcus lactis | ||
| 13764605 | 13764605 | PRJNA1054617_S_NODE_2071_length_343_cov_1.500000_g1983_i0 | PRJNA1054617 | 2071 | 343 | 1.5 | 5.145 | Bacillati | 1783272 | Bacteria | Bacteria | 529 | 1.2299999999999994e-145 | NTclustered | gi|1848626851|gb|CP054017.1| | 1292 | g1983 | i0 | 94.318 | 491.571428571429 | 352 | 9 | 99 | 5 | 1 | 342 | 961730 | 961380 | Staphylococcus warneri strain FDAARGOS_754 chromosome, complete genome | blastn | 168609 | 534 | 0.99063670411985 | Bacteria | Bacillati | Bacillota | Bacilli | Bacillales | Staphylococcaceae | Staphylococcus | Staphylococcus warneri | ||
| 18862829 | 18862829 | PRJNA1054617_S_NODE_8115_length_199_cov_2.814103_g8027_i0 | PRJNA1054617 | 8115 | 199 | 2.814103 | 5.60006497 | root | 1 | Root_unresolved | Root_unresolved | 368 | 1.51e-97 | NTclustered | gi|297343261|gb|HM188414.1| | 1582 | g8027 | i0 | 100 | 120 | 199 | 0 | 100 | 0 | 1 | 199 | 847 | 649 | Lactobacillus casei strain LRSL2 16S ribosomal RNA gene, partial sequence | blastn | 23880 | 368 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Lactobacillales | Lactobacillaceae | Lacticaseibacillus | Lacticaseibacillus casei | ||
| 18862833 | 18862833 | PRJNA1054617_S_NODE_8515_length_196_cov_1.202614_g8427_i0 | PRJNA1054617 | 8515 | 196 | 1.202614 | 2.35712344 | Bacillus | 1386 | Bacteria | Bacteria | 54.7 | 0.005 | NTclustered | gi|2769860694|gb|CP160224.1| | 1408 | g8427 | i0 | 92.105 | 3.97959183673469 | 38 | 3 | 19 | 0 | 2 | 39 | 2682594 | 2682557 | Bacillus pumilus strain JJ950 chromosome, complete genome | blastn | 780 | 54.7 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Bacillales | Bacillaceae | Bacillus | Bacillus pumilus | ||
| 22688118 | 22688118 | PRJNA1054617_S_NODE_9038_length_191_cov_1.243243_g8950_i0 | PRJNA1054617 | 9038 | 191 | 1.243243 | 2.37459413 | Bacillati | 1783272 | Bacteria | Bacteria | 353 | 4.02e-93 | NTclustered | gi|1848626851|gb|CP054017.1| | 1292 | g8950 | i0 | 100 | 460.099476439791 | 191 | 0 | 100 | 0 | 1 | 191 | 1219551 | 1219361 | Staphylococcus warneri strain FDAARGOS_754 chromosome, complete genome | blastn | 87879 | 353 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Bacillales | Staphylococcaceae | Staphylococcus | Staphylococcus warneri | ||
| 27193251 | 27193251 | PRJNA1054617_S_NODE_5602_length_232_cov_1.703704_g5514_i0 | PRJNA1054617 | 5602 | 232 | 1.703704 | 3.95259328 | Oscillibacter sp. | 1945593 | Bacteria | Bacteria | 42.4 | 0.0396 | NR | MCI8817529.1 | 1945593 | g5514 | i0 | 35.3 | 0.65948275862069 | 51 | 33 | 65.9 | 0 | 212 | 60 | 149 | 199 | MCI8817529.1 threonine/serine exporter family protein [Oscillibacter sp.] | diamond | 153 | 42.4 | 1 | Bacteria | Bacillati | Bacillota | Clostridia | Eubacteriales | Oscillospiraceae | Oscillibacter | Oscillibacter sp. | ||
| 30667240 | 30667240 | PRJNA1054617_S_NODE_10153_length_182_cov_2.079137_g10065_i0 | PRJNA1054617 | 10153 | 182 | 2.079137 | 3.78402934 | Clostridia bacterium | 2044939 | Bacteria | Bacteria | 115 | 2.07e-29 | NR | MBQ1206379.1 | 2044939 | g10065 | i0 | 100 | 0.906593406593407 | 55 | 0 | 90.7 | 0 | 182 | 18 | 215 | 269 | MBQ1206379.1 prolyl oligopeptidase family serine peptidase [Clostridia bacterium] | diamond | 165 | 115 | 1 | Bacteria | Bacillati | Bacillota | Clostridia | Clostridia bacterium | |||||
| 31520813 | 31520813 | PRJNA1054617_S_NODE_3976_length_267_cov_1.147321_g3888_i0 | PRJNA1054617 | 3976 | 267 | 1.147321 | 3.06334707 | Oscillospiraceae bacterium | 2485925 | Bacteria | Bacteria | 74.3 | 3.74e-13 | NR | MBE6980081.1 | 2485925 | g3888 | i0 | 88.6 | 0.49438202247191 | 44 | 5 | 49.4 | 0 | 135 | 266 | 1 | 44 | MBE6980081.1 molecular chaperone HtpG [Oscillospiraceae bacterium] | diamond | 132 | 74.3 | 1 | Bacteria | Bacillati | Bacillota | Clostridia | Eubacteriales | Oscillospiraceae | Oscillospiraceae bacterium | |||
| 32374969 | 32374969 | PRJNA1054617_S_NODE_5699_length_230_cov_3.032086_g5611_i0 | PRJNA1054617 | 5699 | 230 | 3.032086 | 6.9737978 | Clostridia bacterium | 2044939 | Bacteria | Bacteria | 141 | 7.54e-39 | NR | MBQ7321579.1 | 2044939 | g5611 | i0 | 90.7 | 0.978260869565217 | 75 | 7 | 97.8 | 0 | 225 | 1 | 52 | 126 | MBQ7321579.1 hypothetical protein [Clostridia bacterium] | diamond | 225 | 141 | 1 | Bacteria | Bacillati | Bacillota | Clostridia | Clostridia bacterium | |||||
| 32438373 | 32438373 | PRJNA1054617_S_NODE_5839_length_228_cov_2.237838_g5751_i0 | PRJNA1054617 | 5839 | 228 | 2.237838 | 5.10227064 | Clostridium sp. | 1506 | Bacteria | Bacteria | 61.2 | 9.25e-9 | NR | MDD6479946.1 | 1506 | g5751 | i0 | 78.4 | 0.486842105263158 | 37 | 8 | 48.7 | 0 | 228 | 118 | 415 | 451 | MDD6479946.1 replicative DNA helicase [Clostridium sp.] | diamond | 111 | 61.2 | 1 | Bacteria | Bacillati | Bacillota | Clostridia | Eubacteriales | Clostridiaceae | Clostridium | Clostridium sp. | ||
| 32501667 | 32501667 | PRJNA1054617_S_NODE_5159_length_240_cov_0.898477_g5071_i0 | PRJNA1054617 | 5159 | 240 | 0.898477 | 2.1563448 | Oscillospiraceae bacterium | 2485925 | Bacteria | Bacteria | 72 | 1.61e-13 | NR | MBE6741008.1 | 2485925 | g5071 | i0 | 48.6 | 3.6 | 72 | 36 | 88.8 | 1 | 27 | 239 | 46 | 117 | MBE6741008.1 restriction endonuclease subunit S [Oscillospiraceae bacterium] | diamond | 864 | 72 | 1 | Bacteria | Bacillati | Bacillota | Clostridia | Eubacteriales | Oscillospiraceae | Oscillospiraceae bacterium |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;