contig_metadata
8 rows where bioproject = "PRJNA1054617" and tax_phylum = "Actinomycetota"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 9104094 | 9104094 | PRJNA1054617_S_NODE_11888_length_170_cov_2.062992_g11800_i0 | PRJNA1054617 | 11888 | 170 | 2.062992 | 3.5070864 | Mycolicibacterium rufum | 318424 | Bacteria | Bacteria | 263 | 6.03e-66 | NTclustered | gi|2294186521|gb|CP092427.2| | 318424 | g11800 | i0 | 94.706 | 276.211764705882 | 170 | 8 | 100 | 1 | 1 | 170 | 209072 | 208904 | Mycolicibacterium rufum strain JCM 16372 chromosome, complete genome | blastn | 46956 | 263 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Mycobacteriales | Mycobacteriaceae | Mycolicibacterium | Mycolicibacterium rufum | ||
| 10379822 | 10379822 | PRJNA1054617_S_NODE_6949_length_213_cov_1.352941_g6861_i0 | PRJNA1054617 | 6949 | 213 | 1.352941 | 2.88176433 | Mycolicibacterium mageritense | 53462 | Bacteria | Bacteria | 394 | 2.7e-105 | NTclustered | gi|1806240795|dbj|AP022567.1| | 53462 | g6861 | i0 | 100 | 164.774647887324 | 213 | 0 | 100 | 0 | 1 | 213 | 194040 | 194252 | Mycolicibacterium mageritense JCM 12375 DNA, complete genome | blastn | 35097 | 394 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Mycobacteriales | Mycobacteriaceae | Mycolicibacterium | Mycolicibacterium mageritense | ||
| 13764642 | 13764642 | PRJNA1054617_S_NODE_851_length_472_cov_3.913753_g765_i0 | PRJNA1054617 | 851 | 472 | 3.913753 | 18.47291416 | Cutibacterium | 1912216 | Bacteria | Bacteria | 859 | 0 | NTclustered | gi|1446500593|gb|CP031442.1| | 1747 | g765 | i0 | 100 | 248.885593220339 | 465 | 0 | 99 | 0 | 1 | 465 | 55844 | 55380 | Cutibacterium acnes strain KCOM 1315 chromosome, complete genome | blastn | 117474 | 859 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Propionibacteriales | Propionibacteriaceae | Cutibacterium | Cutibacterium acnes | ||
| 16313711 | 16313711 | PRJNA1054617_S_NODE_8793_length_193_cov_2.020000_g8705_i0 | PRJNA1054617 | 8793 | 193 | 2.02 | 3.8986 | Microbacterium | 33882 | Bacteria | Bacteria | 346 | 6.82e-91 | NTclustered | gi|1314922424|gb|CP025299.1| | 162426 | g8705 | i0 | 98.964 | 159.844559585492 | 193 | 2 | 100 | 0 | 1 | 193 | 1540030 | 1540222 | Microbacterium hominis strain SJTG1 chromosome, complete genome | blastn | 30850 | 346 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Micrococcales | Microbacteriaceae | Microbacterium | Microbacterium hominis | ||
| 20137677 | 20137677 | PRJNA1054617_S_NODE_4296_length_258_cov_2.953488_g4208_i0 | PRJNA1054617 | 4296 | 258 | 2.953488 | 7.61999904 | Cutibacterium | 1912216 | Bacteria | Bacteria | 477 | 3.2699999999999985e-130 | NTclustered | gi|1446500593|gb|CP031442.1| | 1747 | g4208 | i0 | 100 | 267.957364341085 | 258 | 0 | 100 | 0 | 1 | 258 | 56208 | 56465 | Cutibacterium acnes strain KCOM 1315 chromosome, complete genome | blastn | 69133 | 477 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Propionibacteriales | Propionibacteriaceae | Cutibacterium | Cutibacterium acnes | ||
| 24402462 | 24402462 | PRJNA1054617_S_NODE_12880_length_164_cov_2.016529_g12792_i0 | PRJNA1054617 | 12880 | 164 | 2.016529 | 3.30710756 | Corynebacterium aurimucosum | 169292 | Bacteria | Bacteria | 244 | 2.1e-60 | NTclustered | gi|2891546711|gb|CP160096.1| | 169292 | g12792 | i0 | 94.34 | 31.4634146341463 | 159 | 9 | 97 | 0 | 6 | 164 | 716930 | 717088 | Corynebacterium aurimucosum strain C_04_car chromosome, complete genome | blastn | 5160 | 244 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Mycobacteriales | Corynebacteriaceae | Corynebacterium | Corynebacterium aurimucosum | ||
| 24402483 | 24402483 | PRJNA1054617_S_NODE_3740_length_273_cov_2.221739_g3652_i0 | PRJNA1054617 | 3740 | 273 | 2.221739 | 6.06534747 | Mycolicibacterium rufum | 318424 | Bacteria | Bacteria | 505 | 1.6e-138 | NTclustered | gi|2294186521|gb|CP092427.2| | 318424 | g3652 | i0 | 100 | 178.736263736264 | 273 | 0 | 100 | 0 | 1 | 273 | 208090 | 207818 | Mycolicibacterium rufum strain JCM 16372 chromosome, complete genome | blastn | 48795 | 505 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Mycobacteriales | Mycobacteriaceae | Mycolicibacterium | Mycolicibacterium rufum | ||
| 32776916 | 32776916 | PRJNA1054617_S_NODE_9540_length_187_cov_1.236111_g9452_i0 | PRJNA1054617 | 9540 | 187 | 1.236111 | 2.31152757 | Streptomyces | 1883 | Bacteria | Bacteria | 41.6 | 0.0466 | NR | WP_198549265.1 | 936756 | g9452 | i0 | 45.7 | 1.47593582887701 | 46 | 22 | 73.8 | 2 | 172 | 35 | 221 | 263 | WP_198549265.1 hypothetical protein [Streptomyces kanasensis] | diamond | 276 | 41.6 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Kitasatosporales | Streptomycetaceae | Streptomyces | Streptomyces kanasensis |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;