RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

3 rows where bioproject = "PRJNA1050291" and tax_phylum = "Annelida"

✎ View and edit SQL

This data as json, CSV (advanced)

analysis 2

tax_superkingdom 1

tax_phylum 1

  • Annelida · 3 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA1050291 · 3 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
1011126 1011126 PRJNA1050291_P_NODE_5201_length_672_cov_7.737896_g4312_i0 PRJNA1050291 5201 672 7.737896 51.99866112 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 115 8.42e-21   NTclustered gi|146189520|emb|AM697674.1| 6359 g4312 i0 97.101 7.59970238095238 69 0 71 2 37 103 70 138 Platynereis dumerilii mRNA for hypothetical protein (ORF1), isolate 2 blastn 5107 115 1 Eukaryota Opisthokonta Metazoa Annelida Polychaeta Phyllodocida Nereididae Platynereis Platynereis dumerilii
10379227 10379227 PRJNA1050291_P_NODE_16589_length_267_cov_2.623711_g15698_i0 PRJNA1050291 16589 267 2.623711 7.00530837 Ailoscolex lacteospumosus 1046305 Annelida Annelida 65.8 3.14e-6   NTclustered gi|2920003484|emb|OZ238865.1| 1046305 g15698 i0 97.368 0.411985018726592 38 1 14 0 18 55 24120998 24120961 Ailoscolex lacteospumosus genome assembly, chromosome: 6 blastn 110 65.8 1 Eukaryota Opisthokonta Metazoa Annelida Clitellata Crassiclitellata Ailoscolecidae Ailoscolex Ailoscolex lacteospumosus
32153386 32153386 PRJNA1050291_P_NODE_5558_length_637_cov_3.003546_g4668_i0 PRJNA1050291 5558 637 3.003546 19.13258802 Helobdella robusta 6412 Annelida Annelida 123 5.6e-32   NR XP_009015338.1 6412 g4668 i0 45.8 1.23390894819466 131 71 61.7 0 584 192 1 131 XP_009015338.1 hypothetical protein HELRODRAFT_160072 [Helobdella robusta] diamond 786 123 1 Eukaryota Opisthokonta Metazoa Annelida Clitellata Rhynchobdellida Glossiphoniidae Helobdella Helobdella robusta

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;