RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA1050291" and tax_kingdom = "Orthornavirae"

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analysis 2

tax_superkingdom 1

tax_phylum 1

tax_kingdom 1

  • Orthornavirae · 2 ✖

bioproject 1

  • PRJNA1050291 · 2 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
19301550 19301550 PRJNA1050291_P_NODE_10536_length_369_cov_715.912162_g9645_i0 PRJNA1050291 10536 369 715.912162 2641.71587778 Betacoronavirus pandemicum 3418604 Viruses Viruses 78.7 5.78e-10   NTclustered gi|2155043487|emb|OV016108.1| 2697049 g9645 i0 92.727 12.3089430894309 55 2 15 2 257 310 30319 30266 Severe acute respiratory syndrome coronavirus 2 genome assembly, chromosome: 1 blastn 4542 78.7 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Nidovirales Coronaviridae Betacoronavirus Betacoronavirus pandemicum
31836745 31836745 PRJNA1050291_P_NODE_15877_length_275_cov_1.564356_g14986_i0 PRJNA1050291 15877 275 1.564356 4.301979 Hangzhou polycipivirus 1 2905456 Viruses Viruses 150 6.739999999999999e-40   NR UHK03208.1 2905456 g14986 i0 86.4 1.95272727272727 88 12 96 0 11 274 254 341 UHK03208.1 MAG: capsid protein [Hangzhou polycipivirus 1] diamond 537 150 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales     Hangzhou polycipivirus 1

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;