RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA1050291", tax_kingdom = "Fungi" and tax_phylum = "Zoopagomycota"

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tax_superkingdom 1

tax_phylum 1

  • Zoopagomycota · 2 ✖

tax_kingdom 1

  • Fungi · 2 ✖

tax_clade 1

bioproject 1

  • PRJNA1050291 · 2 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
1450670 1450670 PRJNA1050291_P_NODE_20962_length_242_cov_2.491124_g20071_i0 PRJNA1050291 20962 242 2.491124 6.02852008 Piptocephalidaceae 78903 Fungi Fungi 141 1.62e-38   NR RKP27383.1 1712513 g20071 i0 80 5.9504132231405 80 16 99.2 0 3 242 48 127 RKP27383.1 hypothetical protein SYNPS1DRAFT_12750 [Syncephalis pseudoplumigaleata] diamond 1440 141 1 Eukaryota Opisthokonta Fungi Zoopagomycota Zoopagomycetes Zoopagales Piptocephalidaceae Syncephalis Syncephalis pseudoplumigaleata
29056547 29056547 PRJNA1050291_P_NODE_10628_length_367_cov_2.976190_g9737_i0 PRJNA1050291 10628 367 2.97619 10.9226173 Basidiobolus ranarum 34480 Fungi Fungi 48.9 8.77e-4   NR KAK9702848.1 34480 g9737 i0 31.4 0.964577656675749 118 71 88.3 2 15 338 168 285 KAK9702848.1 hypothetical protein K7432_011048 [Basidiobolus ranarum] diamond 354 48.9 1 Eukaryota Opisthokonta Fungi Zoopagomycota Basidiobolomycetes Basidiobolales Basidiobolaceae Basidiobolus Basidiobolus ranarum

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;