RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA1050291", tax_clade = "Opisthokonta" and tax_phylum = "Mucoromycota"

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tax_superkingdom 1

tax_phylum 1

  • Mucoromycota · 2 ✖

tax_kingdom 1

tax_clade 1

  • Opisthokonta · 2 ✖

bioproject 1

  • PRJNA1050291 · 2 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
6554233 6554233 PRJNA1050291_P_NODE_9166_length_413_cov_4.497059_g8275_i0 PRJNA1050291 9166 413 4.497059 18.57285367 Fungi 4751 Fungi Fungi 211 1.3599999999999998e-66   NR XP_069240310.1 4840 g8275 i0 85 28.6125907990315 113 17 82.1 0 2 340 103 215 XP_069240310.1 uncharacterized protein VTP01DRAFT_9891 [Rhizomucor pusillus] diamond 11817 211 1 Eukaryota Opisthokonta Fungi Mucoromycota Mucoromycetes Mucorales Lichtheimiaceae Rhizomucor Rhizomucor pusillus
29584747 29584747 PRJNA1050291_P_NODE_10550_length_369_cov_2.851351_g9659_i0 PRJNA1050291 10550 369 2.851351 10.52148519 Eukaryota 2759 Fungi Fungi 88.6 4.02e-20   NR KAI9253728.1 562976 g9659 i0 60.8 5.95121951219512 74 29 60.2 0 286 65 24 97 KAI9253728.1 ribosomal protein S28e-domain-containing protein [Helicostylum pulchrum] diamond 2196 89.4 0.991051454138702 Eukaryota Opisthokonta Fungi Mucoromycota Mucoromycetes Mucorales Mucoraceae Helicostylum Helicostylum pulchrum

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;