RNAquarium Metadata Server
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contig_metadata

3 rows where bioproject = "PRJNA1050291", tax_clade = "Opisthokonta" and tax_phylum = "Mollusca"

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tax_superkingdom 1

tax_phylum 1

  • Mollusca · 3 ✖

tax_kingdom 1

tax_clade 1

  • Opisthokonta · 3 ✖

bioproject 1

  • PRJNA1050291 · 3 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
26908746 26908746 PRJNA1050291_P_NODE_11202_length_353_cov_1.757143_g10311_i0 PRJNA1050291 11202 353 1.757143 6.20271479 Aplysia californica 6500 Mollusca Mollusca 52.8 4.25e-5   NR XP_035826565.1 6500 g10311 i0 33 0.926345609065156 109 61 89.2 5 19 333 774 874 XP_035826565.1 uncharacterized protein LOC101860584 [Aplysia californica] diamond 327 52.8 1 Eukaryota Opisthokonta Metazoa Mollusca Gastropoda Aplysiida Aplysiidae Aplysia Aplysia californica
31931754 31931754 PRJNA1050291_P_NODE_5777_length_612_cov_4.773655_g4887_i0 PRJNA1050291 5777 612 4.773655 29.2147686 Saccostrea echinata 191078 Mollusca Mollusca 47.4 0.00656   NR XP_061186145.1 191078 g4887 i0 46.7 0.426470588235294 45 24 22.1 0 476 610 112 156 XP_061186145.1 uncharacterized protein LOC133194161 [Saccostrea echinata] diamond 261 47.4 1 Eukaryota Opisthokonta Metazoa Mollusca Bivalvia Ostreida Ostreidae Saccostrea Saccostrea echinata
32619528 32619528 PRJNA1050291_P_NODE_15300_length_281_cov_3.120192_g14409_i0 PRJNA1050291 15300 281 3.120192 8.76773952 Stylommatophora 6527 Mollusca Mollusca 81.6 1.98e-17   NR CAL1542939.1 6523 g14409 i0 63.9 3.23487544483986 61 22 65.1 0 280 98 74 134 CAL1542939.1 unnamed protein product [Lymnaea stagnalis] diamond 909 81.6 1 Eukaryota Opisthokonta Metazoa Mollusca Gastropoda   Lymnaeidae Lymnaea Lymnaea stagnalis

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;