RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA1050291" and tax_clade = "Discoba"

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tax_phylum 2

tax_superkingdom 1

tax_clade 1

  • Discoba · 2 ✖

bioproject 1

  • PRJNA1050291 · 2 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
28835396 28835396 PRJNA1050291_P_NODE_21828_length_232_cov_3.157233_g20937_i0 PRJNA1050291 21828 232 3.157233 7.32478056 Porcisia hertigi 2761500 Euglenozoa other_Eukaryota 43.9 0.0129   NR XP_067754661.1 2761500 g20937 i0 40.9 1.51293103448276 66 32 80.2 2 231 46 45 107 XP_067754661.1 hypothetical protein JKF63_02479 [Porcisia hertigi] diamond 351 43.9 1 Eukaryota Discoba   Euglenozoa Kinetoplastea Trypanosomatida Trypanosomatidae Porcisia Porcisia hertigi
32026828 32026828 PRJNA1050291_P_NODE_3078_length_1194_cov_8.086530_g2233_i0 PRJNA1050291 3078 1194 8.08653 96.5531682 Naegleria gruberi 5762 Heterolobosea other_Eukaryota 252 1e-73   NR XP_002676484.1 5762 g2233 i0 40.2 1.81909547738693 361 199 90.7 6 1112 30 289 632 XP_002676484.1 uncharacterized protein NAEGRDRAFT_80022 [Naegleria gruberi] diamond 2172 252 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria gruberi

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;