RNAquarium Metadata Server
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contig_metadata

3 rows where bioproject = "PRJNA1047749" and tax_phylum = "Candidatus Dormiibacterota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Dormiibacterota · 3 ✖

tax_kingdom 1

bioproject 1

  • PRJNA1047749 · 3 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
30383273 30383273 PRJNA1047749_P_NODE_19033_length_312_cov_3.422594_g18766_i0 PRJNA1047749 19033 312 3.422594 10.67849328 Candidatus Dormiibacterota bacterium 2052315 Bacteria Bacteria 180 4.029999999999999e-54   NR HLQ98093.1 2052315 g18766 i0 92.2 0.980769230769231 102 7 97.1 1 305 3 41 142 HLQ98093.1 hypothetical protein [Candidatus Dormiibacterota bacterium] diamond 306 180 1 Bacteria   Bacillati Candidatus Dormiibacterota         Candidatus Dormiibacterota bacterium
32343431 32343431 PRJNA1047749_P_NODE_30219_length_286_cov_8.417840_g29952_i0 PRJNA1047749 30219 286 8.41784 24.0750224 Candidatus Dormiibacterota bacterium 2052315 Bacteria Bacteria 44.7 0.0124   NR HXN01405.1 2052315 g29952 i0 35.6 0.472027972027972 45 29 47.2 0 188 54 183 227 HXN01405.1 oligosaccharide flippase family protein [Candidatus Dormiibacterota bacterium] diamond 135 44.7 1 Bacteria   Bacillati Candidatus Dormiibacterota         Candidatus Dormiibacterota bacterium
32619526 32619526 PRJNA1047749_P_NODE_4780_length_544_cov_3.428875_g4531_i0 PRJNA1047749 4780 544 3.428875 18.65308 Bacillati 1783272 Bacteria Bacteria 139 1.25e-38   NR HVA38109.1 2052315 g4531 i0 54.8 3.57904411764706 126 52 66.7 1 69 431 17 142 HVA38109.1 MarR family transcriptional regulator [Candidatus Dormiibacterota bacterium] diamond 1947 139 1 Bacteria   Bacillati Candidatus Dormiibacterota         Candidatus Dormiibacterota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;