metadata: contig_metadata: 9 rows where bioproject = "PRJNA1047749", tax_kingdom = "Pseudomonadati" and tax

9 rows where bioproject = "PRJNA1047749", tax_kingdom = "Pseudomonadati" and tax_phylum = "Campylobacterota"

descending

Link	rowid ▼	query	bioproject	node	length	coverage	rel_abundance	taxname_lca	taxid_lca	taxoncategory	taxoncategorysimple	bits	evalue	analysis_used	target	taxid	gene	allele	pident	sumperc_cov	alnlen	mismatch	qcov	gapopen	qstart	qend	tstart	tend	target_title	analysis	sumalnlen	maxbits	bits_percmax	tax_superkingdom	tax_kingdom	tax_phylum	tax_class	tax_order	tax_family	tax_genus	tax_species
5277708	5277708	PRJNA1047749_P_NODE_19045_length_312_cov_3.414226_g18778_i0	PRJNA1047749	19045	312	3.414226	10.65238512	Campylobacter showae	204	Bacteria	Bacteria	449	8.85e-122	NTclustered	gi\|1483583525\|emb\|LT631449.1\|	204	g18778	i0	92.81	8.26282051282051	306	17	98	2	4	308	1809102	1808801	Campylobacter showae strain 129_VTPPs genome assembly, chromosome: I	blastn	2578	449	1	Bacteria	Pseudomonadati	Campylobacterota	Epsilonproteobacteria	Campylobacterales	Campylobacteraceae	Campylobacter	Campylobacter showae
11214088	11214088	PRJNA1047749_P_NODE_5289_length_523_cov_6.111111_g5038_i0	PRJNA1047749	5289	523	6.111111	31.96111053	root	1	Root_unresolved	Root_unresolved	948	0	NTclustered	gi\|1226876681\|gb\|CP022559.1\|	197	g5038	i0	100	99.2141491395793	513	0	98	0	1	513	697917	698429	Campylobacter jejuni strain 11168H/araE chromosome, complete genome	blastn	51889	948	1	Bacteria	Pseudomonadati	Campylobacterota	Epsilonproteobacteria	Campylobacterales	Campylobacteraceae	Campylobacter	Campylobacter jejuni
12929023	12929023	PRJNA1047749_P_NODE_42411_length_243_cov_4.058824_g42144_i0	PRJNA1047749	42411	243	4.058824	9.86294232	Candidatus Sulfuricurvum sp. RIFRC-1	1249480	Bacteria	Bacteria	134	7.6e-27	NTclustered	gi\|410997208\|gb\|CP003921.1\|	1249480	g42144	i0	92.473	0.382716049382716	93	7	38	0	93	185	1438	1346	Candidatus Sulfuricurvum sp. RIFRC-1 plasmid, complete sequence	blastn	93	134	1	Bacteria	Pseudomonadati	Campylobacterota	Epsilonproteobacteria	Campylobacterales	Sulfurimonadaceae	Sulfuricurvum	Candidatus Sulfuricurvum sp. RIFRC-1
21412545	21412545	PRJNA1047749_P_NODE_44577_length_236_cov_2.656442_g44310_i0	PRJNA1047749	44577	236	2.656442	6.26920312	Pseudomonadati	3379134	Bacteria	Bacteria	436	4.999999999999999e-118	NTclustered	gi\|1226876681\|gb\|CP022559.1\|	197	g44310	i0	100	100	236	0	100	0	1	236	701375	701140	Campylobacter jejuni strain 11168H/araE chromosome, complete genome	blastn	23600	436	1	Bacteria	Pseudomonadati	Campylobacterota	Epsilonproteobacteria	Campylobacterales	Campylobacteraceae	Campylobacter	Campylobacter jejuni
22687161	22687161	PRJNA1047749_P_NODE_3458_length_618_cov_6.310092_g3221_i0	PRJNA1047749	3458	618	6.310092	38.99636856	root	1	Root_unresolved	Root_unresolved	1142	0	NTclustered	gi\|1226876681\|gb\|CP022559.1\|	197	g3221	i0	100	101	618	0	100	0	1	618	699062	698445	Campylobacter jejuni strain 11168H/araE chromosome, complete genome	blastn	62418	1142	1	Bacteria	Pseudomonadati	Campylobacterota	Epsilonproteobacteria	Campylobacterales	Campylobacteraceae	Campylobacter	Campylobacter jejuni
27351602	27351602	PRJNA1047749_P_NODE_13723_length_335_cov_1.606870_g13459_i0	PRJNA1047749	13723	335	1.60687	5.3830145	Campylobacterota bacterium	2026809	Bacteria	Bacteria	87.8	7.69e-19	NR	RLA68517.1	2026809	g13459	i0	44.7	1.64776119402985	94	50	82.4	2	308	33	2	95	RLA68517.1 MAG: hypothetical protein DRQ78_00075 [Campylobacterota bacterium]	diamond	552	87.8	1	Bacteria	Pseudomonadati	Campylobacterota					Campylobacterota bacterium
28100940	28100940	PRJNA1047749_P_NODE_35665_length_264_cov_4.136126_g35398_i0	PRJNA1047749	35665	264	4.136126	10.91937264	root	1	Root_unresolved	Root_unresolved	153	2.29e-45	NR	MDO7823254.1	210	g35398	i0	93.1	8.89772727272727	87	6	98.9	0	3	263	57	143	MDO7823254.1 DNA polymerase domain-containing protein [Helicobacter pylori]	diamond	2349	153	1	Bacteria	Pseudomonadati	Campylobacterota	Epsilonproteobacteria	Campylobacterales	Helicobacteraceae	Helicobacter	Helicobacter pylori
31014765	31014765	PRJNA1047749_P_NODE_49915_length_209_cov_4.044118_g49648_i0	PRJNA1047749	49915	209	4.044118	8.45220662	Helicobacter pylori	210	Bacteria	Bacteria	58.5	1.74e-9	NR	GAA9208956.1	210	g49648	i0	46	3.64593301435407	63	33	89	1	202	17	3	65	GAA9208956.1 hypothetical protein BTM369_15040 [Helicobacter pylori]	diamond	762	58.5	1	Bacteria	Pseudomonadati	Campylobacterota	Epsilonproteobacteria	Campylobacterales	Helicobacteraceae	Helicobacter	Helicobacter pylori
32564948	32564948	PRJNA1047749_P_NODE_38919_length_253_cov_0.866667_g38652_i0	PRJNA1047749	38919	253	0.866667	2.19266751	Helicobacter pylori	210	Bacteria	Bacteria	43.1	0.0098	NR	GAA6899358.1	210	g38652	i0	43.2	1.51778656126482	44	25	52.2	0	49	180	22	65	GAA6899358.1 hypothetical protein Kyoto207A_1080 [Helicobacter pylori]	diamond	384	43.1	1	Bacteria	Pseudomonadati	Campylobacterota	Epsilonproteobacteria	Campylobacterales	Helicobacteraceae	Helicobacter	Helicobacter pylori

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;