RNAquarium Metadata Server
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contig_metadata

4 rows where bioproject = "PRJNA1047749" and tax_kingdom = "Orthornavirae"

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tax_phylum 2

analysis 2

tax_superkingdom 1

tax_kingdom 1

  • Orthornavirae · 4 ✖

bioproject 1

  • PRJNA1047749 · 4 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
174924 174924 PRJNA1047749_P_NODE_1_length_7251_cov_47.177905_g0_i0 PRJNA1047749 1 7251 47.177905 3420.86989155 Danio blood picornavirus/Zebrafish picornavirus 2 3063761 Viruses Viruses 2488 0   NTclustered gi|2551699335|gb|OK619588.1| 3063761 g0 i0 91.91 0.662391394290443 1780 139 66 5 7 1784 7105 5329 Zebrafish picornavirus 2 isolate AU/2020 polyprotein gene, complete cds blastn 4803 2488 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales Picornaviridae   Danio blood picornavirus/Zebrafish picornavirus 2
1449810 1449810 PRJNA1047749_P_NODE_31342_length_282_cov_1.411483_g31075_i0 PRJNA1047749 31342 282 1.411483 3.98038206 Comovirus siliquae 3047677 Viruses Viruses 494 3.6e-135   NTclustered gi|1905517746|gb|MT526792.1| 12260 g31075 i0 98.566 12.6808510638298 279 4 99 0 1 279 3575 3297 Bean pod mottle virus isolate IA-2018 segment RNA2, complete sequence blastn 3576 494 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales Secoviridae Comovirus Comovirus siliquae
29143298 29143298 PRJNA1047749_P_NODE_33809_length_271_cov_10.893939_g33542_i0 PRJNA1047749 33809 271 10.893939 29.52257469 Viruses 10239 Viruses Viruses 59.3 3.21e-8   NR WZH59143.1 3130032 g33542 i0 53.5 1.91512915129151 43 20 47.6 0 263 135 10 52 WZH59143.1 MAG: RNA-dependent RNA polymerase, partial [Ripablyg virus] diamond 519 59.3 1 Viruses   Orthornavirae Lenarviricota Howeltoviricetes Cryppavirales Mitoviridae   Ripablyg virus
32848015 32848015 PRJNA1047749_P_NODE_80_length_1938_cov_89.558713_g62_i0 PRJNA1047749 80 1938 89.558713 1735.64785794 Hangzhou mito-like virus 5 3028982 Viruses Viruses 367 1.95e-114   NR WEU70943.1 3028982 g62 i0 37.5 1.02012383900929 659 372 98.6 14 6 1916 20 660 WEU70943.1 MAG: RNA-dependent RNA polymerase, partial [Hangzhou mito-like virus 5] diamond 1977 367 1 Viruses   Orthornavirae Lenarviricota Howeltoviricetes Cryppavirales Mitoviridae   Hangzhou mito-like virus 5

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;