RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA1047749", tax_kingdom = "Bacillati" and tax_phylum = "Vulcanimicrobiota"

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tax_superkingdom 1

tax_phylum 1

  • Vulcanimicrobiota · 2 ✖

tax_kingdom 1

  • Bacillati · 2 ✖

bioproject 1

  • PRJNA1047749 · 2 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
30762075 30762075 PRJNA1047749_P_NODE_20554_length_312_cov_2.602510_g20287_i0 PRJNA1047749 20554 312 2.60251 8.1198312 Candidatus Elarobacter sp. 3047550 Bacteria Bacteria 92.8 4.68e-20   NR HEV2737233.1 3047550 g20287 i0 89.8 0.471153846153846 49 5 47.1 0 149 3 160 208 HEV2737233.1 NmrA family NAD(P)-binding protein [Candidatus Elarobacter sp.] diamond 147 92.8 1 Bacteria   Bacillati Vulcanimicrobiota Vulcanimicrobiia Vulcanimicrobiales Vulcanimicrobiaceae Candidatus Elarobacter Candidatus Elarobacter sp.
32280115 32280115 PRJNA1047749_P_NODE_50959_length_202_cov_9.829457_g50692_i0 PRJNA1047749 50959 202 9.829457 19.85550314 Vulcanimicrobiota bacterium 3107663 Bacteria Bacteria 101 2.36e-24   NR MFA5504664.1 3107663 g50692 i0 79.7 1.9009900990099 64 13 95 0 11 202 70 133 MFA5504664.1 TlyA family RNA methyltransferase [Vulcanimicrobiota bacterium] diamond 384 101 1 Bacteria   Bacillati Vulcanimicrobiota         Vulcanimicrobiota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;