RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA1047749", tax_clade = "Opisthokonta" and tax_phylum = "Cnidaria"

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tax_superkingdom 1

tax_phylum 1

  • Cnidaria · 2 ✖

tax_kingdom 1

tax_clade 1

  • Opisthokonta · 2 ✖

bioproject 1

  • PRJNA1047749 · 2 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
11653822 11653822 PRJNA1047749_P_NODE_43330_length_241_cov_2.261905_g43063_i0 PRJNA1047749 43330 241 2.261905 5.45119105 Stylophora pistillata 50429 Cnidaria other_Eukaryota 58.4 4.66e-4   NTclustered gi|1270087967|ref|XM_022951744.1| 50429 g43063 i0 100 0.128630705394191 31 0 13 0 95 125 4082 4112 PREDICTED: Stylophora pistillata uncharacterized LOC111344510 (LOC111344510), mRNA blastn 31 58.4 1 Eukaryota Opisthokonta Metazoa Cnidaria Anthozoa Scleractinia Pocilloporidae Stylophora Stylophora pistillata
18026962 18026962 PRJNA1047749_P_NODE_36115_length_262_cov_7.010582_g35848_i0 PRJNA1047749 36115 262 7.010582 18.36772484 Anemonia sulcata 6108 Cnidaria other_Eukaryota 56.5 0.002   NTclustered gi|2917940731|emb|OZ237564.1| 6108 g35848 i0 100 0.114503816793893 30 0 11 0 225 254 9141208 9141237 Anemonia sulcata genome assembly, chromosome: 10 blastn 30 56.5 1 Eukaryota Opisthokonta Metazoa Cnidaria Anthozoa Actiniaria Actiniidae Anemonia Anemonia sulcata

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;