RNAquarium Metadata Server
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contig_metadata

3 rows where bioproject = "PRJNA1047749" and tax_clade = "Discoba"

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tax_phylum 2

tax_superkingdom 1

tax_clade 1

  • Discoba · 3 ✖

bioproject 1

  • PRJNA1047749 · 3 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
26845644 26845644 PRJNA1047749_P_NODE_20281_length_312_cov_2.748954_g20014_i0 PRJNA1047749 20281 312 2.748954 8.57673648 Bodo saltans 75058 Euglenozoa other_Eukaryota 66.2 4.66e-10   NR CUG93978.1 75058 g20014 i0 63.8 0.451923076923077 47 17 45.2 0 1 141 384 430 CUG93978.1 protein kinase, putative [Bodo saltans] diamond 141 66.2 1 Eukaryota Discoba   Euglenozoa Kinetoplastea Eubodonida Bodonidae Bodo Bodo saltans
29025183 29025183 PRJNA1047749_P_NODE_26868_length_298_cov_3.448889_g26601_i0 PRJNA1047749 26868 298 3.448889 10.27768922 Naegleria gruberi 5762 Heterolobosea other_Eukaryota 65.9 8.08e-12   NR NP_066542.1 5762 g26601 i0 72.1 0.432885906040268 43 12 43.3 0 170 298 1 43 NP_066542.1 ATP synthase F0 subunit 9 [Naegleria gruberi] diamond 129 65.9 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria gruberi
32525251 32525251 PRJNA1047749_P_NODE_37679_length_257_cov_2.222826_g37412_i0 PRJNA1047749 37679 257 2.222826 5.71266282 Trypanosoma 5690 Euglenozoa other_Eukaryota 52.4 1.84e-5   NR XP_028879919.1 67003 g37412 i0 60.5 3.54863813229572 38 15 44.4 0 1 114 1726 1763 XP_028879919.1 uncharacterized protein TM35_000321680 [Trypanosoma theileri] diamond 912 52.4 1 Eukaryota Discoba   Euglenozoa Kinetoplastea Trypanosomatida Trypanosomatidae Trypanosoma Trypanosoma theileri

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;