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contig_metadata

8 rows where bioproject = "PRJNA1047749", tax_clade = "Bacteria candidate phyla" and tax_phylum = "Candidatus Saccharimonadota"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Candidatus Saccharimonadota · 8 ✖

tax_clade 1

  • Bacteria candidate phyla · 8 ✖

bioproject 1

  • PRJNA1047749 · 8 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
16752096 16752096 PRJNA1047749_P_NODE_35954_length_263_cov_3.210526_g35687_i0 PRJNA1047749 35954 263 3.210526 8.44368338 Candidatus Saccharibacteria bacterium oral taxon 955 2572087 Bacteria Bacteria 135 2.32e-27   NTclustered gi|1842052453|gb|CP040010.1| 2572087 g35687 i0 94.382 41.2965779467681 89 4 33 1 11 98 754935 755023 Candidatus Saccharibacteria bacterium oral taxon 955 strain CM003 chromosome, complete genome blastn 10861 135 1 Bacteria Bacteria candidate phyla   Candidatus Saccharimonadota         Candidatus Saccharibacteria bacterium oral taxon 955
19300945 19300945 PRJNA1047749_P_NODE_36736_length_260_cov_4.165775_g36469_i0 PRJNA1047749 36736 260 4.165775 10.831015 Candidatus Saccharibacteria bacterium GW2011_GWC2_44_17 1619070 Bacteria Bacteria 448 2.5899999999999996e-121   NTclustered gi|837350690|gb|CP011211.1| 1619070 g36469 i0 100 0.930769230769231 242 0 93 0 1 242 360197 360438 Candidatus Saccharibacteria bacterium GW2011_GWC2_44_17, complete genome blastn 242 448 1 Bacteria Bacteria candidate phyla   Candidatus Saccharimonadota         Candidatus Saccharibacteria bacterium GW2011_GWC2_44_17
27193193 27193193 PRJNA1047749_P_NODE_18522_length_312_cov_3.757322_g18255_i0 PRJNA1047749 18522 312 3.757322 11.72284464 Candidatus Saccharimonadota bacterium 2026720 Bacteria Bacteria 100 1.7199999999999995e-23   NR NCU30100.1 2026720 g18255 i0 100 0.480769230769231 50 0 48.1 0 312 163 144 193 NCU30100.1 hypothetical protein [Candidatus Saccharibacteria bacterium] diamond 150 100 1 Bacteria Bacteria candidate phyla   Candidatus Saccharimonadota         Candidatus Saccharimonadota bacterium
27256519 27256519 PRJNA1047749_P_NODE_34903_length_267_cov_4.206186_g34636_i0 PRJNA1047749 34903 267 4.206186 11.23051662 Candidatus Saccharimonadia bacterium 2890869 Bacteria Bacteria 76.3 7.93e-14   NR HSX06161.1 2890869 g34636 i0 59.1 2.2247191011236 66 23 74.2 1 68 265 1 62 HSX06161.1 DNA translocase FtsK 4TM domain-containing protein [Candidatus Saccharimonadia bacterium] diamond 594 76.3 1 Bacteria Bacteria candidate phyla   Candidatus Saccharimonadota Candidatus Saccharimonadia       Candidatus Saccharimonadia bacterium
28519778 28519778 PRJNA1047749_P_NODE_48067_length_220_cov_10.605442_g47800_i0 PRJNA1047749 48067 220 10.605442 23.3319724 Candidatus Saccharimonadota bacterium 2026720 Bacteria Bacteria 122 3.8499999999999996e-31   NR HMR72506.1 2026720 g47800 i0 74 0.995454545454545 73 19 99.5 0 1 219 29 101 HMR72506.1 glycoside hydrolase family 57 protein [Candidatus Saccharibacteria bacterium] diamond 219 122 1 Bacteria Bacteria candidate phyla   Candidatus Saccharimonadota         Candidatus Saccharimonadota bacterium
29237879 29237879 PRJNA1047749_P_NODE_27149_length_297_cov_4.946429_g26882_i0 PRJNA1047749 27149 297 4.946429 14.69089413 Bacteria 2 Bacteria Bacteria 69.3 3.13e-11   NR MBC7565073.1 2026720 g26882 i0 87.8 2.48484848484848 41 5 41.4 0 296 174 563 603 MBC7565073.1 threonine--tRNA ligase [Candidatus Saccharibacteria bacterium] diamond 738 69.3 1 Bacteria Bacteria candidate phyla   Candidatus Saccharimonadota         Candidatus Saccharimonadota bacterium
29340688 29340688 PRJNA1047749_P_NODE_24609_length_301_cov_3.109649_g24342_i0 PRJNA1047749 24609 301 3.109649 9.36004349 Candidatus Saccharimonadales bacterium 2973664 Bacteria Bacteria 168 1.27e-47   NR MEO5499008.1 2973664 g24342 i0 74.6 1.13621262458472 114 13 97.7 1 296 3 355 468 MEO5499008.1 hypothetical protein [Candidatus Saccharimonadales bacterium] diamond 342 168 1 Bacteria Bacteria candidate phyla   Candidatus Saccharimonadota Candidatus Saccharimonadia Candidatus Saccharimonadales     Candidatus Saccharimonadales bacterium
30446223 30446223 PRJNA1047749_P_NODE_47433_length_225_cov_5.625000_g47166_i0 PRJNA1047749 47433 225 5.625 12.65625 Candidatus Saccharimonadota bacterium 2026720 Bacteria Bacteria 121 1.3799999999999998e-31   NR NCC19598.1 2026720 g47166 i0 91.7 0.96 72 6 96 0 8 223 33 104 NCC19598.1 hypothetical protein [Candidatus Saccharibacteria bacterium] diamond 216 121 1 Bacteria Bacteria candidate phyla   Candidatus Saccharimonadota         Candidatus Saccharimonadota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;