RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA1047749", tax_clade = "Bacteria candidate phyla" and tax_phylum = "Candidatus Poribacteria"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Poribacteria · 2 ✖

tax_clade 1

  • Bacteria candidate phyla · 2 ✖

bioproject 1

  • PRJNA1047749 · 2 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
30920171 30920171 PRJNA1047749_P_NODE_22054_length_307_cov_6.829060_g21787_i0 PRJNA1047749 22054 307 6.82906 20.9652142 Candidatus Poribacteria bacterium 2026781 Bacteria Bacteria 147 1.95e-38   NR MBI1926087.1 2026781 g21787 i0 57.7 7.28013029315961 149 15 98.7 1 306 4 309 457 MBI1926087.1 PAS domain S-box protein [Candidatus Poribacteria bacterium] diamond 2235 147 1 Bacteria Bacteria candidate phyla   Candidatus Poribacteria         Candidatus Poribacteria bacterium
31394271 31394271 PRJNA1047749_P_NODE_18216_length_312_cov_3.979079_g17949_i0 PRJNA1047749 18216 312 3.979079 12.41472648 Candidatus Poribacteria bacterium 2026781 Bacteria Bacteria 112 3.76e-27   NR MCE2413234.1 2026781 g17949 i0 45.5 4.66346153846154 121 44 95.2 1 8 304 159 279 MCE2413234.1 SMP-30/gluconolactonase/LRE family protein [Candidatus Poribacteria bacterium] diamond 1455 112 1 Bacteria Bacteria candidate phyla   Candidatus Poribacteria         Candidatus Poribacteria bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;