RNAquarium Metadata Server
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contig_metadata

3 rows where bioproject = "PRJNA1047749", tax_clade = "Bacteria candidate phyla" and tax_phylum = "Candidatus Methylomirabilota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Methylomirabilota · 3 ✖

tax_clade 1

  • Bacteria candidate phyla · 3 ✖

bioproject 1

  • PRJNA1047749 · 3 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
26686957 26686957 PRJNA1047749_P_NODE_16521_length_312_cov_6.104603_g16254_i0 PRJNA1047749 16521 312 6.104603 19.04636136 Candidatus Methylomirabilia bacterium 3159506 Bacteria Bacteria 80.5 4.8e-15   NR MFQ5829716.1 3159506 g16254 i0 31.1 2.30769230769231 190 41 96.2 1 312 13 107 296 MFQ5829716.1 PAS domain S-box protein [Candidatus Methylomirabilia bacterium] diamond 720 80.5 1 Bacteria Bacteria candidate phyla   Candidatus Methylomirabilota Candidatus Methylomirabilia       Candidatus Methylomirabilia bacterium
27635694 27635694 PRJNA1047749_P_NODE_16244_length_312_cov_6.807531_g15977_i0 PRJNA1047749 16244 312 6.807531 21.239496720000002 Candidatus Methylomirabilis lanthanidiphila 2211376 Bacteria Bacteria 82.4 2.14e-18   NR MBZ0168169.1 2211376 g15977 i0 85.7 2.82692307692308 42 6 40.4 0 3 128 20 61 MBZ0168169.1 type II toxin-antitoxin system HicA family toxin [Candidatus Methylomirabilis lanthanidiphila] diamond 882 82.4 1 Bacteria Bacteria candidate phyla   Candidatus Methylomirabilota Candidatus Methylomirabilia Candidatus Methylomirabilales Candidatus Methylomirabilaceae Candidatus Methylomirabilis Candidatus Methylomirabilis lanthanidiphila
30667179 30667179 PRJNA1047749_P_NODE_11213_length_373_cov_7.070000_g10949_i0 PRJNA1047749 11213 373 7.07 26.3711 Candidatus Methylomirabilota bacterium 2072417 Bacteria Bacteria 93.2 2.7400000000000004e-21   NR MEE8282520.1 2072417 g10949 i0 70.3 1.15817694369973 74 21 59.5 1 150 371 39 111 MEE8282520.1 PAS domain-containing protein [Candidatus Methylomirabilota bacterium] diamond 432 93.2 1 Bacteria Bacteria candidate phyla   Candidatus Methylomirabilota         Candidatus Methylomirabilota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;