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contig_metadata

10 rows where bioproject = "PRJNA1047551" and tax_superkingdom = "Viruses"

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tax_kingdom 2

analysis 2

tax_superkingdom 1

  • Viruses · 10 ✖

bioproject 1

  • PRJNA1047551 · 10 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
6552433 6552433 PRJNA1047551_S_NODE_10386_length_165_cov_6.415385_g10259_i0 PRJNA1047551 10386 165 6.415385 10.58538525 Crogonang virus 9 3062921 Viruses Viruses 134 4.7900000000000005e-27   NTclustered gi|2836327217|gb|PQ161481.1| 3062921 g10259 i0 97.436 1.78181818181818 78 2 47 0 18 95 9031 9108 MAG: Crogonang virus 9 isolate CS13 RNA-dependent RNA polymerase and capsid protein genes, complete cds blastn 294 134 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales     Crogonang virus 9
12928375 12928375 PRJNA1047551_S_NODE_5651_length_207_cov_1.040698_g5524_i0 PRJNA1047551 5651 207 1.040698 2.15424486 Malassezia restricta virus MrV40L 2727863 Viruses Viruses 372 1.2199999999999997e-98   NTclustered gi|1832308141|gb|MN603497.1| 2727863 g5524 i0 99.034 1 207 2 100 0 1 207 2902 2696 Malassezia restricta virus MrV40L, complete genome blastn 207 372 1 Viruses   Orthornavirae Duplornaviricota Chrymotiviricetes Ghabrivirales Totiviridae   Malassezia restricta virus MrV40L
15477417 15477417 PRJNA1047551_S_NODE_533_length_585_cov_8.032727_g420_i0 PRJNA1047551 533 585 8.032727 46.99145295 Botourmiaviridae sp. 2808997 Viruses Viruses 464 6.27e-126   NTclustered gi|2320142628|gb|ON585088.1| 2808997 g420 i0 82.545 0.94017094017094 550 75 92 20 37 574 2001 2541 MAG: Botourmiaviridae sp. isolate PMS2_Contig239 RNA-dependent RNA polymerase gene, complete cds blastn 550 464 1 Viruses   Orthornavirae Lenarviricota Miaviricetes Ourlivirales Botourmiaviridae   Botourmiaviridae sp.
16751476 16751476 PRJNA1047551_S_NODE_1934_length_322_cov_15.780488_g1807_i0 PRJNA1047551 1934 322 15.780488 50.81317136 Monilinia fructicola mitovirus 10 2964643 Viruses Viruses 337 7.449999999999997e-88   NTclustered gi|2273758207|gb|ON038384.1| 2964643 g1807 i0 90.837 1.26086956521739 251 23 78 0 71 321 14 264 Monilinia fructicola mitovirus 10 RNA-dependent RNA polymerase gene, complete cds blastn 406 337 1 Viruses   Orthornavirae Lenarviricota Howeltoviricetes Cryppavirales Mitoviridae Mitovirus Monilinia fructicola mitovirus 10
18026401 18026401 PRJNA1047551_S_NODE_3055_length_265_cov_1.686957_g2928_i0 PRJNA1047551 3055 265 1.686957 4.47043605 Coltivirus dermacentoris 3428066 Viruses Viruses 424 4.46e-114   NTclustered gi|2758887253|gb|PP473574.1| 46839 g2928 i0 95.472 75.1811320754717 265 12 100 0 1 265 4808 4544 MAG: Colorado tick fever virus isolate HL11 segment 1, complete sequence blastn 19923 424 1 Viruses   Orthornavirae Duplornaviricota Resentoviricetes Reovirales Spinareoviridae Coltivirus Coltivirus dermacentoris
20575693 20575693 PRJNA1047551_S_NODE_3897_length_239_cov_1.769608_g3770_i0 PRJNA1047551 3897 239 1.769608 4.22936312 Caudoviricetes sp. 2832643 Viruses Viruses 361 3.14e-95   NTclustered gi|2057177473|tpg|BK058946.1| 2832643 g3770 i0 93.827 7.07531380753138 243 10 100 4 1 239 32829 32588 MAG TPA_asm: Caudoviricetes sp. isolate ctbxB6, partial genome blastn 1691 361 1 Viruses   Heunggongvirae Uroviricota Caudoviricetes       Caudoviricetes sp.
26686946 26686946 PRJNA1047551_S_NODE_3521_length_249_cov_1.878505_g3394_i0 PRJNA1047551 3521 249 1.878505 4.67747745 Downy mildew lesion associated splipalmivirus 1 2719492 Viruses Viruses 95.9 4.0900000000000002e-22   NR WNA22205.1 2719492 g3394 i0 90 0.602409638554217 50 5 60.2 0 242 93 189 238 WNA22205.1 MAG: hypothetical protein [Downy mildew lesion associated splipalmivirus 1] diamond 150 95.9 1 Viruses   Orthornavirae Lenarviricota Amabiliviricetes Wolframvirales Narnaviridae Narnavirus Downy mildew lesion associated splipalmivirus 1
28488136 28488136 PRJNA1047551_S_NODE_4867_length_218_cov_2.316940_g4740_i0 PRJNA1047551 4867 218 2.3169400000000002 5.0509292 Sophora japonica powdery mildew-associated partitivirus 1891704 Viruses Viruses 61.2 7.97e-9   NR YP_009272945.1 1891704 g4740 i0 78.4 0.509174311926605 37 8 50.9 0 217 107 491 527 YP_009272945.1 putative coat protein [Sophora japonica powdery mildew-associated partitivirus] diamond 111 61.2 1 Viruses   Orthornavirae Pisuviricota Duplopiviricetes Durnavirales Partitiviridae   Sophora japonica powdery mildew-associated partitivirus
31678621 31678621 PRJNA1047551_S_NODE_13337_length_151_cov_2.465517_g13210_i0 PRJNA1047551 13337 151 2.465517 3.72293067 Totivirus sp. 2776824 Viruses Viruses 108 1.1e-27   NR QOQ37363.1 2776824 g13210 i0 98 0.973509933774834 49 1 97.4 0 3 149 131 179 QOQ37363.1 RNA-dependent RNA polymerase, partial [Totivirus sp.] diamond 147 108 1 Viruses   Orthornavirae Duplornaviricota Chrymotiviricetes Ghabrivirales Orthototiviridae Totivirus Totivirus sp.
32564932 32564932 PRJNA1047551_S_NODE_9459_length_171_cov_2.132353_g9332_i0 PRJNA1047551 9459 171 2.132353 3.64632363 Grapevine alphapartitivirus 3113821 Viruses Viruses 80.9 4.77e-16   NR WRQ19776.1 3113821 g9332 i0 68.5 0.947368421052632 54 17 94.7 0 8 169 383 436 WRQ19776.1 MAG: coat protein [Grapevine alphapartitivirus] diamond 162 80.9 1 Viruses   Orthornavirae Pisuviricota Duplopiviricetes Durnavirales Partitiviridae Alphapartitivirus Grapevine alphapartitivirus

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;