contig_metadata
51 rows where bioproject = "PRJNA1047551" and tax_phylum = "Chordata"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 174622 | 174622 | PRJNA1047551_S_NODE_3741_length_243_cov_2.076923_g3614_i0 | PRJNA1047551 | 3741 | 243 | 2.076923 | 5.04692289 | Mus musculus | 10090 | Chordata | Chordata | 449 | 6.65e-122 | NTclustered | gi|23499699|gb|AC114820.4| | 10090 | g3614 | i0 | 100 | 1 | 243 | 0 | 100 | 0 | 1 | 243 | 21682 | 21924 | Mus musculus BAC clone RP23-70M6 from 18, complete sequence | blastn | 243 | 449 | 1 | Eukaryota | Opisthokonta | Metazoa | Chordata | Mammalia | Rodentia | Muridae | Mus | Mus musculus | |
| 174716 | 174716 | PRJNA1047551_S_NODE_7301_length_188_cov_1.411765_g7174_i0 | PRJNA1047551 | 7301 | 188 | 1.411765 | 2.6541182 | Mus musculus | 10090 | Chordata | Chordata | 342 | 8.539999999999999e-90 | NTclustered | gi|354795653|gb|JN960154.1| | 10090 | g7174 | i0 | 99.468 | 4 | 188 | 1 | 100 | 0 | 1 | 188 | 26915 | 27102 | Mus musculus targeted deletion, lacZ-tagged mutant allele Mbnl2:tm1(KOMP)Ucd; transgenic | blastn | 752 | 342 | 1 | Eukaryota | Opisthokonta | Metazoa | Chordata | Mammalia | Rodentia | Muridae | Mus | Mus musculus | |
| 1009842 | 1009842 | PRJNA1047551_S_NODE_6601_length_195_cov_1.356250_g6474_i0 | PRJNA1047551 | 6601 | 195 | 1.35625 | 2.6446875 | Bos | 9903 | Chordata | Chordata | 361 | 2.46e-95 | NTclustered | gi|2587638007|ref|XM_002692936.5| | 9913 | g6474 | i0 | 100 | 99.7794871794872 | 195 | 0 | 100 | 0 | 1 | 195 | 2657 | 2851 | PREDICTED: Bos taurus transmembrane protein 123 (TMEM123), mRNA | blastn | 19457 | 361 | 1 | Eukaryota | Opisthokonta | Metazoa | Chordata | Mammalia | Artiodactyla | Bovidae | Bos | Bos taurus | |
| 1449165 | 1449165 | PRJNA1047551_S_NODE_10242_length_166_cov_2.267176_g10115_i0 | PRJNA1047551 | 10242 | 166 | 2.267176 | 3.76351216 | Mus musculus | 10090 | Chordata | Chordata | 60.2 | 8.31e-5 | NTclustered | gi|58801809|gb|AC116725.13| | 10090 | g10115 | i0 | 88.462 | 20.5421686746988 | 52 | 3 | 31 | 3 | 14 | 65 | 114927 | 114879 | Mus musculus chromosome 8, clone RP23-272P20, complete sequence | blastn | 3410 | 60.2 | 1 | Eukaryota | Opisthokonta | Metazoa | Chordata | Mammalia | Rodentia | Muridae | Mus | Mus musculus | |
| 1449339 | 1449339 | PRJNA1047551_S_NODE_4282_length_229_cov_2.536082_g4155_i0 | PRJNA1047551 | 4282 | 229 | 2.536082 | 5.80762778 | Oenanthe melanoleuca | 2939378 | Chordata | Chordata | 111 | 3.32e-20 | NTclustered | gi|2511716757|ref|XM_056514985.1| | 2939378 | g4155 | i0 | 83.761 | 16.1921397379913 | 117 | 19 | 51 | 0 | 1 | 117 | 1383 | 1499 | PREDICTED: Oenanthe melanoleuca tubulin alpha 1b (TUBA1B), mRNA | blastn | 3708 | 111 | 1 | Eukaryota | Opisthokonta | Metazoa | Chordata | Aves | Passeriformes | Muscicapidae | Oenanthe | Oenanthe melanoleuca | |
| 1449368 | 1449368 | PRJNA1047551_S_NODE_5362_length_211_cov_1.818182_g5235_i0 | PRJNA1047551 | 5362 | 211 | 1.818182 | 3.83636402 | Mus musculus | 10090 | Chordata | Chordata | 390 | 3.459999999999999e-104 | NTclustered | gi|118764548|emb|CT571270.13| | 10090 | g5235 | i0 | 100 | 121.791469194313 | 211 | 0 | 100 | 0 | 1 | 211 | 22765 | 22555 | Mouse DNA sequence from clone RP23-294G7 on chromosome 2, complete sequence | blastn | 25698 | 390 | 1 | Eukaryota | Opisthokonta | Metazoa | Chordata | Mammalia | Rodentia | Muridae | Mus | Mus musculus | |
| 2285077 | 2285077 | PRJNA1047551_S_NODE_10982_length_162_cov_1.724409_g10855_i0 | PRJNA1047551 | 10982 | 162 | 1.724409 | 2.79354258 | Bos | 9903 | Chordata | Chordata | 300 | 4.36e-77 | NTclustered | gi|149642714|ref|NM_001098951.1| | 9913 | g10855 | i0 | 100 | 33.9691358024691 | 162 | 0 | 100 | 0 | 1 | 162 | 307 | 468 | Bos taurus cardiolipin synthase 1 (CRLS1), mRNA | blastn | 5503 | 300 | 1 | Eukaryota | Opisthokonta | Metazoa | Chordata | Mammalia | Artiodactyla | Bovidae | Bos | Bos taurus | |
| 2725190 | 2725190 | PRJNA1047551_S_NODE_6683_length_194_cov_1.666667_g6556_i0 | PRJNA1047551 | 6683 | 194 | 1.666667 | 3.23333398 | Mus musculus | 10090 | Chordata | Chordata | 359 | 8.809999999999999e-95 | NTclustered | gi|74210794|dbj|AK142347.1| | 10090 | g6556 | i0 | 100 | 100 | 194 | 0 | 100 | 0 | 1 | 194 | 1619 | 1812 | Mus musculus 13 days embryo lung cDNA, RIKEN full-length enriched library, clone:D430013J24 product:nuclear factor, erythroid derived 2, like 2, full insert sequence | blastn | 19400 | 359 | 1 | Eukaryota | Opisthokonta | Metazoa | Chordata | Mammalia | Rodentia | Muridae | Mus | Mus musculus | |
| 4837879 | 4837879 | PRJNA1047551_S_NODE_12344_length_155_cov_2.683333_g12217_i0 | PRJNA1047551 | 12344 | 155 | 2.683333 | 4.15916615 | Mus | 10088 | Chordata | Chordata | 287 | 3.21e-73 | NTclustered | gi|846387786|dbj|LC061991.1| | 10090 | g12217 | i0 | 100 | 100 | 155 | 0 | 100 | 0 | 1 | 155 | 1193 | 1039 | Mus musculus mitochondrion DNA, including ATP6, COX3, tRNA-Gly, ND3, tRNA-Arg, ND4L, ND4 genes, complete sequence, sequence_id: (8070..10988)_18 | blastn | 15500 | 287 | 1 | Eukaryota | Opisthokonta | Metazoa | Chordata | Mammalia | Rodentia | Muridae | Mus | Mus musculus | |
| 4837881 | 4837881 | PRJNA1047551_S_NODE_12724_length_154_cov_1.504202_g12597_i0 | PRJNA1047551 | 12724 | 154 | 1.504202 | 2.31647108 | Mus | 10088 | Chordata | Chordata | 285 | 1.14e-72 | NTclustered | gi|12859568|dbj|AK019389.1| | 10090 | g12597 | i0 | 100 | 31.4935064935065 | 154 | 0 | 100 | 0 | 1 | 154 | 74 | 227 | Mus musculus 12 days embryo head cDNA, RIKEN full-length enriched library, clone:3010025M23 product:beta-2 microglobulin, full insert sequence | blastn | 4850 | 285 | 1 | Eukaryota | Opisthokonta | Metazoa | Chordata | Mammalia | Rodentia | Muridae | Mus | Mus musculus | |
| 5277294 | 5277294 | PRJNA1047551_S_NODE_10625_length_164_cov_1.682171_g10498_i0 | PRJNA1047551 | 10625 | 164 | 1.682171 | 2.75876044 | Balearica regulorum | 925459 | Chordata | Chordata | 99 | 1.73e-16 | NTclustered | gi|723575319|ref|XM_010309373.1| | 100784 | g10498 | i0 | 83.654 | 6.51219512195122 | 104 | 17 | 63 | 0 | 1 | 104 | 286 | 389 | PREDICTED: Balearica regulorum gibbericeps histone H2A.V-like (LOC104640876), partial mRNA | blastn | 1068 | 99 | 1 | Eukaryota | Opisthokonta | Metazoa | Chordata | Aves | Gruiformes | Gruidae | Balearica | Balearica regulorum | |
| 5277299 | 5277299 | PRJNA1047551_S_NODE_10745_length_163_cov_2.335938_g10618_i0 | PRJNA1047551 | 10745 | 163 | 2.335938 | 3.80757894 | Mus musculus | 10090 | Chordata | Chordata | 302 | 1.22e-77 | NTclustered | gi|345199289|ref|NM_001243903.1| | 10090 | g10618 | i0 | 100 | 94.6687116564417 | 163 | 0 | 100 | 0 | 1 | 163 | 87 | 249 | Mus musculus predicted gene 14322 (Gm14322), transcript variant 1, mRNA | blastn | 15431 | 302 | 1 | Eukaryota | Opisthokonta | Metazoa | Chordata | Mammalia | Rodentia | Muridae | Mus | Mus musculus | |
| 5277519 | 5277519 | PRJNA1047551_S_NODE_7605_length_185_cov_1.626667_g7478_i0 | PRJNA1047551 | 7605 | 185 | 1.626667 | 3.00933395 | Mus musculus | 10090 | Chordata | Chordata | 313 | 6.56e-81 | NTclustered | gi|45384730|gb|AC145307.3| | 10090 | g7478 | i0 | 100 | 1.82702702702703 | 169 | 0 | 91 | 0 | 1 | 169 | 64505 | 64673 | Mus musculus BAC clone RP24-400C6 from chromosome 17, complete sequence | blastn | 338 | 313 | 1 | Eukaryota | Opisthokonta | Metazoa | Chordata | Mammalia | Rodentia | Muridae | Mus | Mus musculus | |
| 6112990 | 6112990 | PRJNA1047551_S_NODE_7385_length_187_cov_1.611842_g7258_i0 | PRJNA1047551 | 7385 | 187 | 1.611842 | 3.01414454 | Aves | 8782 | Chordata | Chordata | 52.8 | 0.016 | NTclustered | gi|2716873288|ref|XR_010372284.1| | 9209 | g7258 | i0 | 100 | 1.04812834224599 | 28 | 0 | 15 | 0 | 44 | 71 | 1990 | 2017 | PREDICTED: Phalacrocorax carbo uncharacterized LOC135312639 (LOC135312639), transcript variant X8, ncRNA | blastn | 196 | 52.8 | 1 | Eukaryota | Opisthokonta | Metazoa | Chordata | Aves | Suliformes | Phalacrocoracidae | Phalacrocorax | Phalacrocorax carbo | |
| 6552693 | 6552693 | PRJNA1047551_S_NODE_886_length_466_cov_9.777262_g759_i0 | PRJNA1047551 | 886 | 466 | 9.777262 | 45.56204092 | Octodon degus | 10160 | Chordata | Chordata | 100 | 1.59e-16 | NTclustered | gi|1334044774|ref|XR_002822095.1| | 10160 | g759 | i0 | 89.744 | 0.309012875536481 | 78 | 8 | 17 | 0 | 341 | 418 | 136 | 59 | PREDICTED: Octodon degus uncharacterized LOC111818020 (LOC111818020), ncRNA | blastn | 144 | 100 | 1 | Eukaryota | Opisthokonta | Metazoa | Chordata | Mammalia | Rodentia | Octodontidae | Octodon | Octodon degus | |
| 7387630 | 7387630 | PRJNA1047551_S_NODE_5346_length_211_cov_2.079545_g5219_i0 | PRJNA1047551 | 5346 | 211 | 2.079545 | 4.38783995 | root | 1 | Root_unresolved | Root_unresolved | 390 | 3.459999999999999e-104 | NTclustered | gi|12846704|dbj|AK010927.1| | 10090 | g5219 | i0 | 100 | 102.03317535545 | 211 | 0 | 100 | 0 | 1 | 211 | 373 | 163 | Mus musculus 13 days embryo liver cDNA, RIKEN full-length enriched library, clone:2510008C04 product:hemoglobin, beta adult major chain, full insert sequence | blastn | 21529 | 390 | 1 | Eukaryota | Opisthokonta | Metazoa | Chordata | Mammalia | Rodentia | Muridae | Mus | Mus musculus | |
| 7387637 | 7387637 | PRJNA1047551_S_NODE_7246_length_188_cov_1.993464_g7119_i0 | PRJNA1047551 | 7246 | 188 | 1.993464 | 3.74771232 | Mus | 10088 | Chordata | Chordata | 348 | 1.84e-91 | NTclustered | gi|846387786|dbj|LC061991.1| | 10090 | g7119 | i0 | 100 | 100 | 188 | 0 | 100 | 0 | 1 | 188 | 583 | 770 | Mus musculus mitochondrion DNA, including ATP6, COX3, tRNA-Gly, ND3, tRNA-Arg, ND4L, ND4 genes, complete sequence, sequence_id: (8070..10988)_18 | blastn | 18800 | 348 | 1 | Eukaryota | Opisthokonta | Metazoa | Chordata | Mammalia | Rodentia | Muridae | Mus | Mus musculus | |
| 7827226 | 7827226 | PRJNA1047551_S_NODE_3547_length_248_cov_2.910798_g3420_i0 | PRJNA1047551 | 3547 | 248 | 2.910798 | 7.21877904 | Ambystoma mexicanum | 8296 | Chordata | Chordata | 124 | 4.6899999999999996e-24 | NTclustered | gi|2851777749|ref|XM_069646746.1| | 8296 | g3420 | i0 | 88.35 | 1.27016129032258 | 103 | 12 | 42 | 0 | 17 | 119 | 470 | 572 | PREDICTED: Ambystoma mexicanum ribosomal protein S15 (RPS15), mRNA | blastn | 315 | 124 | 1 | Eukaryota | Opisthokonta | Metazoa | Chordata | Amphibia | Caudata | Ambystomatidae | Ambystoma | Ambystoma mexicanum | |
| 7827327 | 7827327 | PRJNA1047551_S_NODE_7527_length_186_cov_1.172185_g7400_i0 | PRJNA1047551 | 7527 | 186 | 1.172185 | 2.1802641 | Mus musculus | 10090 | Chordata | Chordata | 344 | 2.34e-90 | NTclustered | gi|354794887|gb|JN959388.1| | 10090 | g7400 | i0 | 100 | 9.29569892473118 | 186 | 0 | 100 | 0 | 1 | 186 | 26276 | 26461 | Mus musculus targeted KO-first, conditional ready, lacZ-tagged mutant allele Orc1:tm1a(KOMP)Wtsi; transgenic | blastn | 1729 | 344 | 1 | Eukaryota | Opisthokonta | Metazoa | Chordata | Mammalia | Rodentia | Muridae | Mus | Mus musculus | |
| 8663045 | 8663045 | PRJNA1047551_S_NODE_3767_length_242_cov_3.425121_g3640_i0 | PRJNA1047551 | 3767 | 242 | 3.425121 | 8.28879282 | Branchiostoma floridae | 7739 | Chordata | Chordata | 95.9 | 6.63e-23 | NR | XP_035670741.1 | 7739 | g3640 | i0 | 88 | 2.47933884297521 | 50 | 6 | 62 | 0 | 220 | 71 | 115 | 164 | XP_035670741.1 peptidyl-prolyl cis-trans isomerase-like [Branchiostoma floridae] | diamond | 600 | 95.9 | 1 | Eukaryota | Opisthokonta | Metazoa | Chordata | Leptocardii | Amphioxiformes | Branchiostomatidae | Branchiostoma | Branchiostoma floridae | |
| 9102114 | 9102114 | PRJNA1047551_S_NODE_13128_length_152_cov_1.854701_g13001_i0 | PRJNA1047551 | 13128 | 152 | 1.854701 | 2.81914552 | Mus musculus | 10090 | Chordata | Chordata | 281 | 1.46e-71 | NTclustered | gi|54633421|gb|AC147595.10| | 10090 | g13001 | i0 | 100 | 33.1644736842105 | 152 | 0 | 100 | 0 | 1 | 152 | 49814 | 49663 | Mus musculus strain RIII clone mgsriii-p1_7 map 6, complete sequence | blastn | 5041 | 281 | 1 | Eukaryota | Opisthokonta | Metazoa | Chordata | Mammalia | Rodentia | Muridae | Mus | Mus musculus | |
| 9102245 | 9102245 | PRJNA1047551_S_NODE_4908_length_218_cov_1.442623_g4781_i0 | PRJNA1047551 | 4908 | 218 | 1.442623 | 3.14491814 | Mus musculus | 10090 | Chordata | Chordata | 401 | 1.6599999999999993e-107 | NTclustered | gi|325995151|ref|NR_037961.1| | 10090 | g4781 | i0 | 100 | 8.36697247706422 | 217 | 0 | 99 | 0 | 2 | 218 | 607 | 391 | Mus musculus RIKEN cDNA 1600020E01 gene (1600020E01Rik), transcript variant 1, long non-coding RNA | blastn | 1824 | 401 | 1 | Eukaryota | Opisthokonta | Metazoa | Chordata | Mammalia | Rodentia | Muridae | Mus | Mus musculus | |
| 10377968 | 10377968 | PRJNA1047551_S_NODE_7869_length_183_cov_1.459459_g7742_i0 | PRJNA1047551 | 7869 | 183 | 1.459459 | 2.67080997 | Mus musculus | 10090 | Chordata | Chordata | 311 | 2.33e-80 | NTclustered | gi|38511694|gb|BC061137.1| | 10090 | g7742 | i0 | 99.415 | 29.3169398907104 | 171 | 1 | 93 | 0 | 1 | 171 | 587 | 417 | Mus musculus surfactant associated protein C, mRNA (cDNA clone MGC:74269 IMAGE:30300758), complete cds | blastn | 5365 | 311 | 1 | Eukaryota | Opisthokonta | Metazoa | Chordata | Mammalia | Rodentia | Muridae | Mus | Mus musculus | |
| 13763188 | 13763188 | PRJNA1047551_S_NODE_12571_length_155_cov_1.125000_g12444_i0 | PRJNA1047551 | 12571 | 155 | 1.125 | 1.74375 | Mus | 10088 | Chordata | Chordata | 287 | 3.21e-73 | NTclustered | gi|1679845231|ref|XM_021163097.2| | 10089 | g12444 | i0 | 100 | 46.7806451612903 | 155 | 0 | 100 | 0 | 1 | 155 | 489 | 643 | PREDICTED: Mus caroli ANTXR cell adhesion molecule 2 (Antxr2), mRNA | blastn | 7251 | 287 | 1 | Eukaryota | Opisthokonta | Metazoa | Chordata | Mammalia | Rodentia | Muridae | Mus | Mus caroli | |
| 14203324 | 14203324 | PRJNA1047551_S_NODE_4272_length_230_cov_1.302564_g4145_i0 | PRJNA1047551 | 4272 | 230 | 1.302564 | 2.9958972 | Xenopus tropicalis | 8364 | Chordata | Chordata | 165 | 2.53e-36 | NTclustered | gi|197246937|gb|BC169173.1| | 8364 | g4145 | i0 | 79.915 | 5.00869565217391 | 234 | 39 | 100 | 7 | 1 | 230 | 1283 | 1054 | Xenopus tropicalis cDNA clone MGC:189660 IMAGE:8885580, complete cds | blastn | 1152 | 165 | 1 | Eukaryota | Opisthokonta | Metazoa | Chordata | Amphibia | Anura | Pipidae | Xenopus | Xenopus tropicalis | |
| 14203344 | 14203344 | PRJNA1047551_S_NODE_4932_length_217_cov_5.175824_g4805_i0 | PRJNA1047551 | 4932 | 217 | 5.175824 | 11.23153808 | Anser cygnoides | 8845 | Chordata | Chordata | 54.7 | 0.005 | NTclustered | gi|2782233662|ref|XM_066981370.1| | 8845 | g4805 | i0 | 100 | 0.133640552995392 | 29 | 0 | 13 | 0 | 97 | 125 | 2530 | 2502 | PREDICTED: Anser cygnoides archain 1 (ARCN1), mRNA | blastn | 29 | 54.7 | 1 | Eukaryota | Opisthokonta | Metazoa | Chordata | Aves | Anseriformes | Anatidae | Anser | Anser cygnoides | |
| 14203353 | 14203353 | PRJNA1047551_S_NODE_5272_length_212_cov_2.774011_g5145_i0 | PRJNA1047551 | 5272 | 212 | 2.774011 | 5.88090332 | Sus scrofa | 9823 | Chordata | Chordata | 56.5 | 0.001 | NTclustered | gi|257207694|emb|FP085448.12| | 9823 | g5145 | i0 | 100 | 0.141509433962264 | 30 | 0 | 14 | 0 | 113 | 142 | 125471 | 125500 | Pig DNA sequence from clone CH242-272C22 on chromosome 12, complete sequence | blastn | 30 | 56.5 | 1 | Eukaryota | Opisthokonta | Metazoa | Chordata | Mammalia | Artiodactyla | Suidae | Sus | Sus scrofa | |
| 14203375 | 14203375 | PRJNA1047551_S_NODE_6252_length_199_cov_1.829268_g6125_i0 | PRJNA1047551 | 6252 | 199 | 1.829268 | 3.64024332 | Petromyzon marinus | 7757 | Chordata | Chordata | 52.8 | 0.017 | NTclustered | gi|1822358920|ref|XM_032980955.1| | 7757 | g6125 | i0 | 100 | 0.14070351758794 | 28 | 0 | 14 | 0 | 93 | 120 | 253 | 280 | PREDICTED: Petromyzon marinus ER membrane protein complex subunit 6 (EMC6), transcript variant X1, mRNA | blastn | 28 | 52.8 | 1 | Eukaryota | Opisthokonta | Metazoa | Chordata | Hyperoartia | Petromyzontiformes | Petromyzontidae | Petromyzon | Petromyzon marinus | |
| 14203396 | 14203396 | PRJNA1047551_S_NODE_7212_length_188_cov_6.895425_g7085_i0 | PRJNA1047551 | 7212 | 188 | 6.895425 | 12.963399 | Metazoa | 33208 | Chordata | Chordata | 74.3 | 2.32e-14 | NR | XP_035657717.1 | 7739 | g7085 | i0 | 82.6 | 3.71808510638298 | 46 | 8 | 73.4 | 0 | 4 | 141 | 171 | 216 | XP_035657717.1 nascent polypeptide-associated complex subunit alpha-like [Branchiostoma floridae] | diamond | 699 | 74.3 | 1 | Eukaryota | Opisthokonta | Metazoa | Chordata | Leptocardii | Amphioxiformes | Branchiostomatidae | Branchiostoma | Branchiostoma floridae | |
| 14203430 | 14203430 | PRJNA1047551_S_NODE_8412_length_179_cov_1.298611_g8285_i0 | PRJNA1047551 | 8412 | 179 | 1.298611 | 2.32451369 | Mus musculus | 10090 | Chordata | Chordata | 331 | 1.74e-86 | NTclustered | gi|1907129102|ref|XM_006525732.4| | 10090 | g8285 | i0 | 100 | 98.2458100558659 | 179 | 0 | 100 | 0 | 1 | 179 | 6530 | 6708 | PREDICTED: Mus musculus solute carrier family 12, member 2 (Slc12a2), transcript variant X1, mRNA | blastn | 17586 | 331 | 1 | Eukaryota | Opisthokonta | Metazoa | Chordata | Mammalia | Rodentia | Muridae | Mus | Mus musculus | |
| 15477325 | 15477325 | PRJNA1047551_S_NODE_2173_length_306_cov_9.007380_g2046_i0 | PRJNA1047551 | 2173 | 306 | 9.00738 | 27.5625828 | Xenopus laevis | 8355 | Chordata | Chordata | 263 | 1.21e-65 | NTclustered | gi|2465583|gb|AF016226.1|AF016226 | 8355 | g2046 | i0 | 98.658 | 15.4640522875817 | 149 | 0 | 48 | 2 | 66 | 212 | 819 | 671 | Xenopus laevis homeobox protein (Siamois) gene, promoter region and partial cds | blastn | 4732 | 263 | 1 | Eukaryota | Opisthokonta | Metazoa | Chordata | Amphibia | Anura | Pipidae | Xenopus | Xenopus laevis | |
| 17587648 | 17587648 | PRJNA1047551_S_NODE_11854_length_158_cov_1.276423_g11727_i0 | PRJNA1047551 | 11854 | 158 | 1.276423 | 2.01674834 | Bovidae | 9895 | Chordata | Chordata | 292 | 7.07e-75 | NTclustered | gi|2633837979|ref|XM_061407637.1| | 9906 | g11727 | i0 | 100 | 78 | 158 | 0 | 100 | 0 | 1 | 158 | 1808 | 1651 | PREDICTED: Bos javanicus ceramide synthase 2 (CERS2), transcript variant X2, mRNA | blastn | 12324 | 292 | 1 | Eukaryota | Opisthokonta | Metazoa | Chordata | Mammalia | Artiodactyla | Bovidae | Bos | Bos javanicus | |
| 18026464 | 18026464 | PRJNA1047551_S_NODE_5135_length_214_cov_2.642458_g5008_i0 | PRJNA1047551 | 5135 | 214 | 2.642458 | 5.65486012 | Dromaius novaehollandiae | 8790 | Chordata | Chordata | 52.8 | 0.019 | NTclustered | gi|2718521694|ref|XM_026094507.2| | 8790 | g5008 | i0 | 100 | 0.392523364485981 | 28 | 0 | 13 | 0 | 130 | 157 | 5134 | 5107 | PREDICTED: Dromaius novaehollandiae potassium sodium-activated channel subfamily T member 1 (KCNT1), transcript variant X3, mRNA | blastn | 84 | 52.8 | 1 | Eukaryota | Opisthokonta | Metazoa | Chordata | Aves | Casuariiformes | Dromaiidae | Dromaius | Dromaius novaehollandiae | |
| 19300300 | 19300300 | PRJNA1047551_S_NODE_13496_length_151_cov_1.250000_g13369_i0 | PRJNA1047551 | 13496 | 151 | 1.25 | 1.8875 | Mus musculus | 10090 | Chordata | Chordata | 279 | 5.19e-71 | NTclustered | gi|114053511|gb|AC138613.6| | 10090 | g13369 | i0 | 100 | 3 | 151 | 0 | 100 | 0 | 1 | 151 | 92417 | 92267 | Mus musculus BAC clone RP24-105J12 from chromosome 5, complete sequence | blastn | 453 | 279 | 1 | Eukaryota | Opisthokonta | Metazoa | Chordata | Mammalia | Rodentia | Muridae | Mus | Mus musculus | |
| 20575544 | 20575544 | PRJNA1047551_S_NODE_10277_length_166_cov_1.832061_g10150_i0 | PRJNA1047551 | 10277 | 166 | 1.832061 | 3.04122126 | Oxyura jamaicensis | 8884 | Chordata | Chordata | 202 | 1.2999999999999998e-47 | NTclustered | gi|1865204353|ref|XM_035340746.1| | 8884 | g10150 | i0 | 88.957 | 217.277108433735 | 163 | 18 | 98 | 0 | 1 | 163 | 500 | 338 | PREDICTED: Oxyura jamaicensis ubiquitin C (UBC), transcript variant X1, mRNA | blastn | 36068 | 202 | 1 | Eukaryota | Opisthokonta | Metazoa | Chordata | Aves | Anseriformes | Anatidae | Oxyura | Oxyura jamaicensis | |
| 20575727 | 20575727 | PRJNA1047551_S_NODE_4917_length_218_cov_1.355191_g4790_i0 | PRJNA1047551 | 4917 | 218 | 1.355191 | 2.95431638 | Pyrrhula murina | 928672 | Chordata | Chordata | 52.8 | 0.019 | NTclustered | gi|2920008266|emb|OZ238999.1| | 928672 | g4790 | i0 | 100 | 0.128440366972477 | 28 | 0 | 13 | 0 | 125 | 152 | 23503073 | 23503100 | Pyrrhula murina genome assembly, chromosome: 5 | blastn | 28 | 52.8 | 1 | Eukaryota | Opisthokonta | Metazoa | Chordata | Aves | Passeriformes | Fringillidae | Pyrrhula | Pyrrhula murina | |
| 20575826 | 20575826 | PRJNA1047551_S_NODE_917_length_459_cov_4.702830_g790_i0 | PRJNA1047551 | 917 | 459 | 4.70283 | 21.5859897 | Octodon degus | 10160 | Chordata | Chordata | 100 | 1.57e-16 | NTclustered | gi|1334044774|ref|XR_002822095.1| | 10160 | g790 | i0 | 89.744 | 0.313725490196078 | 78 | 8 | 17 | 0 | 49 | 126 | 59 | 136 | PREDICTED: Octodon degus uncharacterized LOC111818020 (LOC111818020), ncRNA | blastn | 144 | 100 | 1 | Eukaryota | Opisthokonta | Metazoa | Chordata | Mammalia | Rodentia | Octodontidae | Octodon | Octodon degus | |
| 21411886 | 21411886 | PRJNA1047551_S_NODE_9637_length_170_cov_1.859259_g9510_i0 | PRJNA1047551 | 9637 | 170 | 1.859259 | 3.1607403 | Bovidae | 9895 | Chordata | Chordata | 315 | 1.64e-81 | NTclustered | gi|154425932|gb|BC151429.1| | 9913 | g9510 | i0 | 100 | 90.8058823529412 | 170 | 0 | 100 | 0 | 1 | 170 | 1226 | 1057 | Bos taurus Mof4 family associated protein 1, mRNA (cDNA clone MGC:179288 IMAGE:8040707), complete cds | blastn | 15437 | 315 | 1 | Eukaryota | Opisthokonta | Metazoa | Chordata | Mammalia | Artiodactyla | Bovidae | Bos | Bos taurus | |
| 22686675 | 22686675 | PRJNA1047551_S_NODE_10018_length_168_cov_1.300752_g9891_i0 | PRJNA1047551 | 10018 | 168 | 1.300752 | 2.18526336 | Bos | 9903 | Chordata | Chordata | 311 | 2.11e-80 | NTclustered | gi|2587638007|ref|XM_002692936.5| | 9913 | g9891 | i0 | 100 | 100 | 168 | 0 | 100 | 0 | 1 | 168 | 3314 | 3481 | PREDICTED: Bos taurus transmembrane protein 123 (TMEM123), mRNA | blastn | 16800 | 311 | 1 | Eukaryota | Opisthokonta | Metazoa | Chordata | Mammalia | Artiodactyla | Bovidae | Bos | Bos taurus | |
| 22686693 | 22686693 | PRJNA1047551_S_NODE_5198_length_213_cov_3.157303_g5071_i0 | PRJNA1047551 | 5198 | 213 | 3.157303 | 6.72505539 | Didelphidae | 9265 | Chordata | Chordata | 54.7 | 0.005 | NTclustered | gi|2514310932|ref|XM_001370131.4| | 13616 | g5071 | i0 | 96.97 | 0.309859154929577 | 33 | 0 | 15 | 1 | 12 | 43 | 984 | 1016 | PREDICTED: Monodelphis domestica triosephosphate isomerase 1 (TPI1), mRNA | blastn | 66 | 54.7 | 1 | Eukaryota | Opisthokonta | Metazoa | Chordata | Mammalia | Didelphimorphia | Didelphidae | Monodelphis | Monodelphis domestica | |
| 22686700 | 22686700 | PRJNA1047551_S_NODE_6418_length_197_cov_1.783951_g6291_i0 | PRJNA1047551 | 6418 | 197 | 1.783951 | 3.51438347 | Bos | 9903 | Chordata | Chordata | 364 | 1.929999999999999e-96 | NTclustered | gi|2587638007|ref|XM_002692936.5| | 9913 | g6291 | i0 | 100 | 99.3299492385787 | 197 | 0 | 100 | 0 | 1 | 197 | 3843 | 4039 | PREDICTED: Bos taurus transmembrane protein 123 (TMEM123), mRNA | blastn | 19568 | 364 | 1 | Eukaryota | Opisthokonta | Metazoa | Chordata | Mammalia | Artiodactyla | Bovidae | Bos | Bos taurus | |
| 23126884 | 23126884 | PRJNA1047551_S_NODE_3279_length_257_cov_3.207207_g3152_i0 | PRJNA1047551 | 3279 | 257 | 3.207207 | 8.24252199 | Echinops telfairi | 9371 | Chordata | Chordata | 52.8 | 0.023 | NTclustered | gi|2160821932|ref|XM_045292683.1| | 9371 | g3152 | i0 | 100 | 0.108949416342412 | 28 | 0 | 11 | 0 | 195 | 222 | 1250 | 1223 | PREDICTED: Echinops telfairi poliovirus receptor homolog (LOC123521982), mRNA | blastn | 28 | 52.8 | 1 | Eukaryota | Opisthokonta | Metazoa | Chordata | Mammalia | Tenrecidae | Echinops | Echinops telfairi | ||
| 24400553 | 24400553 | PRJNA1047551_S_NODE_12360_length_155_cov_2.258333_g12233_i0 | PRJNA1047551 | 12360 | 155 | 2.258333 | 3.50041615 | Mus musculus | 10090 | Chordata | Chordata | 287 | 3.21e-73 | NTclustered | gi|23499699|gb|AC114820.4| | 10090 | g12233 | i0 | 100 | 1 | 155 | 0 | 100 | 0 | 1 | 155 | 21552 | 21706 | Mus musculus BAC clone RP23-70M6 from 18, complete sequence | blastn | 155 | 287 | 1 | Eukaryota | Opisthokonta | Metazoa | Chordata | Mammalia | Rodentia | Muridae | Mus | Mus musculus | |
| 24400602 | 24400602 | PRJNA1047551_S_NODE_200_length_864_cov_4.318456_g78_i1 | PRJNA1047551 | 200 | 864 | 4.318456 | 37.31145984 | Hylomyscus aeta | 337582 | Chordata | Chordata | 80.5 | 3.99e-10 | NTclustered | gi|1789851112|gb|MN845633.1| | 337582 | g78 | i1 | 80.374 | 1.41319444444444 | 107 | 19 | 12 | 2 | 697 | 802 | 9256 | 9361 | Hylomyscus aeta voucher FMNH202862 mitochondrion, complete genome | blastn | 1221 | 80.5 | 1 | Eukaryota | Opisthokonta | Metazoa | Chordata | Mammalia | Rodentia | Muridae | Hylomyscus | Hylomyscus aeta | |
| 25236144 | 25236144 | PRJNA1047551_S_NODE_13120_length_152_cov_1.863248_g12993_i0 | PRJNA1047551 | 13120 | 152 | 1.863248 | 2.83213696 | root | 1 | Root_unresolved | Root_unresolved | 52.8 | 0.012 | NTclustered | gi|1851947135|ref|XM_034990570.1| | 9715 | g12993 | i0 | 96.875 | 2.13157894736842 | 32 | 0 | 20 | 1 | 32 | 62 | 2672 | 2641 | PREDICTED: Mirounga leonina GTP binding protein 2 (GTPBP2), transcript variant X2, mRNA | blastn | 324 | 52.8 | 1 | Eukaryota | Opisthokonta | Metazoa | Chordata | Mammalia | Carnivora | Phocidae | Mirounga | Mirounga leonina | |
| 27288099 | 27288099 | PRJNA1047551_S_NODE_10043_length_168_cov_1.052632_g9916_i0 | PRJNA1047551 | 10043 | 168 | 1.052632 | 1.76842176 | Helopsaltes ochotensis | 3150915 | Chordata | Chordata | 47 | 4.48e-4 | NR | NXO41889.1 | 3150915 | g9916 | i0 | 40 | 0.892857142857143 | 50 | 25 | 89.3 | 1 | 4 | 153 | 726 | 770 | NXO41889.1 GRD2I protein [Helopsaltes ochotensis] | diamond | 150 | 47 | 1 | Eukaryota | Opisthokonta | Metazoa | Chordata | Aves | Passeriformes | Locustellidae | Helopsaltes | Helopsaltes ochotensis | |
| 30690622 | 30690622 | PRJNA1047551_S_NODE_7073_length_190_cov_1.587097_g6946_i0 | PRJNA1047551 | 7073 | 190 | 1.587097 | 3.0154843 | Eukaryota | 2759 | unresolved_Eukaryota | other_Eukaryota | 52 | 9.8199999999999992e-06 | NR | CAH1244151.1 | 7740 | g6946 | i0 | 78.8 | 62.7 | 33 | 7 | 52.1 | 0 | 173 | 75 | 1084 | 1116 | CAH1244151.1 SKIV2L2 [Branchiostoma lanceolatum] | diamond | 11913 | 52.4 | 0.99236641221374 | Eukaryota | Opisthokonta | Metazoa | Chordata | Leptocardii | Amphioxiformes | Branchiostomatidae | Branchiostoma | Branchiostoma lanceolatum | |
| 31101291 | 31101291 | PRJNA1047551_S_NODE_2115_length_310_cov_1.767273_g1988_i0 | PRJNA1047551 | 2115 | 310 | 1.767273 | 5.4785463 | Opisthokonta | 33154 | Chordata | Chordata | 95.9 | 1.85e-21 | NR | CAB3240919.1 | 59560 | g1988 | i0 | 71.9 | 13.0838709677419 | 64 | 18 | 61.9 | 0 | 23 | 214 | 214 | 277 | CAB3240919.1 elongation factor 1-delta [Phallusia mammillata] | diamond | 4056 | 95.9 | 1 | Eukaryota | Opisthokonta | Metazoa | Chordata | Ascidiacea | Phlebobranchia | Ascidiidae | Phallusia | Phallusia mammillata | |
| 31646958 | 31646958 | PRJNA1047551_S_NODE_4997_length_216_cov_3.701657_g4870_i0 | PRJNA1047551 | 4997 | 216 | 3.701657 | 7.99557912 | Peromyscus leucopus | 10041 | Chordata | Chordata | 43.9 | 0.0104 | NR | XP_037052804.1 | 10041 | g4870 | i0 | 50 | 0.666666666666667 | 48 | 22 | 63.9 | 1 | 46 | 183 | 320 | 367 | XP_037052804.1 translation initiation factor IF-2-like [Peromyscus leucopus] | diamond | 144 | 43.9 | 1 | Eukaryota | Opisthokonta | Metazoa | Chordata | Mammalia | Rodentia | Cricetidae | Peromyscus | Peromyscus leucopus | |
| 31805225 | 31805225 | PRJNA1047551_S_NODE_3857_length_240_cov_1.868293_g3730_i0 | PRJNA1047551 | 3857 | 240 | 1.868293 | 4.4839032 | Styela clava | 7725 | Chordata | Chordata | 53.9 | 4.22e-6 | NR | XP_039274248.1 | 7725 | g3730 | i0 | 67.6 | 0.4625 | 37 | 12 | 46.3 | 0 | 237 | 127 | 720 | 756 | XP_039274248.1 long-chain-fatty-acid--CoA ligase 1-like [Styela clava] | diamond | 111 | 53.9 | 1 | Eukaryota | Opisthokonta | Metazoa | Chordata | Ascidiacea | Stolidobranchia | Styelidae | Styela | Styela clava | |
| 32784924 | 32784924 | PRJNA1047551_S_NODE_8040_length_181_cov_5.541096_g7913_i0 | PRJNA1047551 | 8040 | 181 | 5.541096 | 10.02938376 | Pleurodeles waltl | 8319 | Chordata | Chordata | 48.9 | 8.17e-5 | NR | KAJ1185330.1 | 8319 | g7913 | i0 | 50 | 0.895027624309392 | 54 | 22 | 81.2 | 1 | 33 | 179 | 44 | 97 | KAJ1185330.1 hypothetical protein NDU88_002123 [Pleurodeles waltl] | diamond | 162 | 48.9 | 1 | Eukaryota | Opisthokonta | Metazoa | Chordata | Amphibia | Caudata | Salamandridae | Pleurodeles | Pleurodeles waltl |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;