RNAquarium Metadata Server
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contig_metadata

1 row where bioproject = "PRJNA1047551" and tax_phylum = "Candidatus Magasanikiibacteriota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Magasanikiibacteriota · 1 ✖

tax_clade 1

bioproject 1

  • PRJNA1047551 · 1 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27762105 27762105 PRJNA1047551_S_NODE_4284_length_229_cov_2.252577_g4157_i0 PRJNA1047551 4284 229 2.252577 5.15840133 Candidatus Magasanikbacteria bacterium RIFOXYC2_FULL_42_28 1798704 Bacteria Bacteria 90.9 2.96e-19   NR OGH88075.1 1798704 g4157 i0 76.4 1.45414847161572 55 13 72.1 0 4 168 422 476 OGH88075.1 MAG: adenosylhomocysteinase [Candidatus Magasanikbacteria bacterium RIFOXYC2_FULL_42_28] diamond 333 90.9 1 Bacteria Bacteria candidate phyla   Candidatus Magasanikiibacteriota         Candidatus Magasanikbacteria bacterium RIFOXYC2_FULL_42_28

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;