RNAquarium Metadata Server
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contig_metadata

3 rows where bioproject = "PRJNA1047551", tax_kingdom = "Orthornavirae" and tax_phylum = "Lenarviricota"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Lenarviricota · 3 ✖

tax_kingdom 1

  • Orthornavirae · 3 ✖

bioproject 1

  • PRJNA1047551 · 3 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
15477417 15477417 PRJNA1047551_S_NODE_533_length_585_cov_8.032727_g420_i0 PRJNA1047551 533 585 8.032727 46.99145295 Botourmiaviridae sp. 2808997 Viruses Viruses 464 6.27e-126   NTclustered gi|2320142628|gb|ON585088.1| 2808997 g420 i0 82.545 0.94017094017094 550 75 92 20 37 574 2001 2541 MAG: Botourmiaviridae sp. isolate PMS2_Contig239 RNA-dependent RNA polymerase gene, complete cds blastn 550 464 1 Viruses   Orthornavirae Lenarviricota Miaviricetes Ourlivirales Botourmiaviridae   Botourmiaviridae sp.
16751476 16751476 PRJNA1047551_S_NODE_1934_length_322_cov_15.780488_g1807_i0 PRJNA1047551 1934 322 15.780488 50.81317136 Monilinia fructicola mitovirus 10 2964643 Viruses Viruses 337 7.449999999999997e-88   NTclustered gi|2273758207|gb|ON038384.1| 2964643 g1807 i0 90.837 1.26086956521739 251 23 78 0 71 321 14 264 Monilinia fructicola mitovirus 10 RNA-dependent RNA polymerase gene, complete cds blastn 406 337 1 Viruses   Orthornavirae Lenarviricota Howeltoviricetes Cryppavirales Mitoviridae Mitovirus Monilinia fructicola mitovirus 10
26686946 26686946 PRJNA1047551_S_NODE_3521_length_249_cov_1.878505_g3394_i0 PRJNA1047551 3521 249 1.878505 4.67747745 Downy mildew lesion associated splipalmivirus 1 2719492 Viruses Viruses 95.9 4.0900000000000002e-22   NR WNA22205.1 2719492 g3394 i0 90 0.602409638554217 50 5 60.2 0 242 93 189 238 WNA22205.1 MAG: hypothetical protein [Downy mildew lesion associated splipalmivirus 1] diamond 150 95.9 1 Viruses   Orthornavirae Lenarviricota Amabiliviricetes Wolframvirales Narnaviridae Narnavirus Downy mildew lesion associated splipalmivirus 1

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;