RNAquarium Metadata Server
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contig_metadata

3 rows where bioproject = "PRJNA1047551", tax_kingdom = "Metazoa" and tax_phylum = "Rotifera"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Rotifera · 3 ✖

tax_kingdom 1

  • Metazoa · 3 ✖

tax_clade 1

bioproject 1

  • PRJNA1047551 · 3 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
20136251 20136251 PRJNA1047551_S_NODE_4456_length_225_cov_3.052632_g4329_i0 PRJNA1047551 4456 225 3.052632 6.868422 Ploima 84394 Rotifera other_Eukaryota 241 3.9800000000000004e-59   NTclustered gi|1859640894|gb|MN970216.1| 360698 g4329 i0 86.283 7.24444444444444 226 25 98 3 1 221 12308 12532 Proales similis mitochondrion, complete genome blastn 1630 241 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Ploima Proalidae Proales Proales similis
27153164 27153164 PRJNA1047551_S_NODE_7042_length_190_cov_2.058065_g6915_i0 PRJNA1047551 7042 190 2.058065 3.9103235 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 67.4 1.59e-12   NR CAF1025278.1 104777 g6915 i0 85.7 1.10526315789474 35 5 55.3 0 173 69 85 119 CAF1025278.1 unnamed protein product [Brachionus calyciflorus] diamond 210 67.8 0.994100294985251 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Ploima Brachionidae Brachionus Brachionus calyciflorus
32153353 32153353 PRJNA1047551_S_NODE_9078_length_174_cov_1.474820_g8951_i0 PRJNA1047551 9078 174 1.47482 2.5661868 Brachionus calyciflorus 104777 Rotifera other_Eukaryota 72 6.47e-13   NR CAF1015019.1 104777 g8951 i0 60 0.948275862068966 55 22 94.8 0 167 3 353 407 CAF1015019.1 unnamed protein product [Brachionus calyciflorus] diamond 165 72 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Ploima Brachionidae Brachionus Brachionus calyciflorus

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;