RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA1047551", tax_kingdom = "Metazoa" and tax_phylum = "Porifera"

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tax_superkingdom 1

tax_phylum 1

  • Porifera · 2 ✖

tax_kingdom 1

  • Metazoa · 2 ✖

tax_clade 1

bioproject 1

  • PRJNA1047551 · 2 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
28551363 28551363 PRJNA1047551_S_NODE_10307_length_166_cov_1.610687_g10180_i0 PRJNA1047551 10307 166 1.610687 2.67374042 Geodia barretti 519541 Porifera other_Eukaryota 86.3 1.12e-20   NR CAI8054677.1 519541 g10180 i0 80 0.903614457831325 50 10 90.4 0 150 1 15 64 CAI8054677.1 Protein transport protein Sec61 subunit gamma [Geodia barretti] diamond 150 86.3 1 Eukaryota Opisthokonta Metazoa Porifera Demospongiae Tetractinellida Geodiidae Geodia Geodia barretti
32784921 32784921 PRJNA1047551_S_NODE_6380_length_197_cov_3.074074_g6253_i0 PRJNA1047551 6380 197 3.074074 6.05592578 Amphimedon queenslandica 400682 Porifera other_Eukaryota 52.8 5.11e-6   NR XP_003387052.1 400682 g6253 i0 47.3 5.16243654822335 55 26 79.2 1 197 42 220 274 XP_003387052.1 PREDICTED: 60S ribosomal protein L7a-like [Amphimedon queenslandica] diamond 1017 52.8 1 Eukaryota Opisthokonta Metazoa Porifera Demospongiae Haplosclerida Niphatidae Amphimedon Amphimedon queenslandica

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;