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contig_metadata

11 rows where bioproject = "PRJNA1047551", tax_clade = "Sar" and tax_phylum = "Ciliophora"

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tax_superkingdom 1

tax_phylum 1

  • Ciliophora · 11 ✖

tax_clade 1

  • Sar · 11 ✖

bioproject 1

  • PRJNA1047551 · 11 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
174521 174521 PRJNA1047551_S_NODE_12101_length_156_cov_6.173554_g11974_i0 PRJNA1047551 12101 156 6.173554 9.63074424 Tokophrya huangmeiensis 1501436 SAR_Eukaryotes SAR_Eukaryotes 237 3.31e-58   NTclustered gi|636571939|gb|KJ567607.1| 1501436 g11974 i0 98.507 82.9102564102564 134 2 86 0 23 156 927 1060 Tokophrya huangmeiensis small subunit ribosomal RNA gene, partial sequence blastn 12934 237 1 Eukaryota Sar   Ciliophora Phyllopharyngea Endogenida Tokophryidae Tokophrya Tokophrya huangmeiensis
2725016 2725016 PRJNA1047551_S_NODE_12323_length_155_cov_4.083333_g12196_i0 PRJNA1047551 12323 155 4.083333 6.32916615 Pseudoblepharisma tenue 2528046 SAR_Eukaryotes SAR_Eukaryotes 207 2.57e-49   NTclustered gi|2362972807|gb|OP912402.1| 2528046 g12196 i0 94.737 79.9354838709677 133 7 86 0 1 133 2264 2132 Pseudoblepharisma tenue isolate MG01 internal transcribed spacer region, partial sequence blastn 12390 207 1 Eukaryota Sar   Ciliophora Heterotrichea Heterotrichida Blepharismidae Pseudoblepharisma Pseudoblepharisma tenue
4001194 4001194 PRJNA1047551_S_NODE_7324_length_187_cov_21.072368_g7197_i0 PRJNA1047551 7324 187 21.072368 39.40532816 Philasterides dicentrarchi 282688 SAR_Eukaryotes SAR_Eukaryotes 209 8.98e-50   NTclustered gi|49616744|gb|AY643504.1| 282688 g7197 i0 87.027 71.144385026738 185 24 99 0 1 185 291 107 Philasterides dicentrarchi 26S ribosomal RNA gene, partial sequence blastn 13304 209 1 Eukaryota Sar   Ciliophora Oligohymenophorea Philasterida Philasteridae Philasterides Philasterides dicentrarchi
5277408 5277408 PRJNA1047551_S_NODE_3245_length_258_cov_6.591928_g3118_i0 PRJNA1047551 3245 258 6.591928 17.00717424 Kyaroikeus paracetarius 2684852 SAR_Eukaryotes SAR_Eukaryotes 128 3.79e-25   NTclustered gi|1784308422|gb|MN830170.1| 2684852 g3118 i0 89.899 14.2519379844961 99 10 38 0 100 198 99 1 Kyaroikeus paracetarius isolate LJ-I-20170502 large subunit ribosomal RNA gene, partial sequence blastn 3677 128 1 Eukaryota Sar   Ciliophora Phyllopharyngea Dysteriida Kyaroikeidae Kyaroikeus Kyaroikeus paracetarius
12928179 12928179 PRJNA1047551_S_NODE_10051_length_167_cov_5.060606_g9924_i0 PRJNA1047551 10051 167 5.060606 8.45121202 Planilamina ovata 2684848 SAR_Eukaryotes SAR_Eukaryotes 172 1.0299999999999999e-38   NTclustered gi|1784308423|gb|MN830171.1| 2684848 g9924 i0 85.802 69.8802395209581 162 23 97 0 3 164 170 331 Planilamina ovata isolate LJ-II-20170502 large subunit ribosomal RNA gene, partial sequence blastn 11670 172 1 Eukaryota Sar   Ciliophora Phyllopharyngea Dysteriida Kyaroikeidae Planilamina Planilamina ovata
12928461 12928461 PRJNA1047551_S_NODE_9131_length_173_cov_7.746377_g9004_i0 PRJNA1047551 9131 173 7.746377 13.40123221 Philasterides dicentrarchi 282688 SAR_Eukaryotes SAR_Eukaryotes 161 2.31e-35   NTclustered gi|49616744|gb|AY643504.1| 282688 g9004 i0 84.393 7.10982658959538 173 18 97 9 4 171 275 107 Philasterides dicentrarchi 26S ribosomal RNA gene, partial sequence blastn 1230 161 1 Eukaryota Sar   Ciliophora Oligohymenophorea Philasterida Philasteridae Philasterides Philasterides dicentrarchi
15037504 15037504 PRJNA1047551_S_NODE_2232_length_302_cov_35.037453_g2105_i0 PRJNA1047551 2232 302 35.037453 105.81310806 Epistylis 155142 SAR_Eukaryotes SAR_Eukaryotes 379 1.14e-100   NTclustered gi|759083557|gb|KM222174.1| 1607876 g2105 i0 97.727 72.0562913907285 220 5 73 0 83 302 401 182 Epistylis sp. FG-2015 voucher SZ2011052302 large subunit ribosomal RNA gene, partial sequence blastn 21761 379 1 Eukaryota Sar   Ciliophora Oligohymenophorea Sessilida Epistylidae Epistylis Epistylis sp. FG-2015
18026354 18026354 PRJNA1047551_S_NODE_13775_length_150_cov_1.060870_g13648_i0 PRJNA1047551 13775 150 1.06087 1.591305 Lembadion sp. FG-2015 1607877 SAR_Eukaryotes SAR_Eukaryotes 235 1.13e-57   NTclustered gi|759083556|gb|KM222173.1| 1607877 g13648 i0 95.27 0.986666666666667 148 7 99 0 3 150 535 388 Lembadion sp. FG-2015 voucher FYB2013031305 large subunit ribosomal RNA gene, partial sequence blastn 148 235 1 Eukaryota Sar   Ciliophora Oligohymenophorea Peniculida Lembadionidae Lembadion Lembadion sp. FG-2015
21411865 21411865 PRJNA1047551_S_NODE_3497_length_249_cov_18.247664_g3370_i0 PRJNA1047551 3497 249 18.247664 45.43668336 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 244 3.46e-60   NTclustered gi|1246280602|gb|MF992249.1| 35107 g3370 i0 86.087 92.3172690763052 230 29 92 3 22 249 90 318 Uronema marinum isolate ZZF20170302 large subunit ribosomal RNA gene, partial sequence blastn 22987 244 1 Eukaryota Sar   Ciliophora Oligohymenophorea Philasterida Uronematidae Uronema Uronema marinum
21411885 21411885 PRJNA1047551_S_NODE_9577_length_170_cov_24.525926_g9450_i0 PRJNA1047551 9577 170 24.525926 41.6940742 Tetrahymena 5890 SAR_Eukaryotes SAR_Eukaryotes 244 2.19e-60   NTclustered gi|10782|emb|X54004.1| 5908 g9450 i0 94.41 91.3647058823529 161 5 94 3 9 167 2998 3156 Tetrahymena pyriformis gene for 26S large subunit ribosomal RNA blastn 15532 244 1 Eukaryota Sar   Ciliophora Oligohymenophorea Hymenostomatida Tetrahymenidae Tetrahymena Tetrahymena pyriformis
25236159 25236159 PRJNA1047551_S_NODE_4400_length_226_cov_16.696335_g4273_i0 PRJNA1047551 4400 226 16.696335 37.7337171 Euplotes 5935 SAR_Eukaryotes SAR_Eukaryotes 350 6.37e-92   NTclustered gi|6980030|gb|AF223571.1|AF223571 5940 g4273 i0 96.262 94.3053097345133 214 7 94 1 14 226 731 944 Euplotes aediculatus internal transcribed spacer 1, 5.8S ribosomal RNA gene, internal transcribed spacer 2, and 28S ribosomal RNA gene, complete sequence blastn 21313 350 1 Eukaryota Sar   Ciliophora Spirotrichea Euplotida Euplotidae Euplotes Euplotes aediculatus

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;