RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA1047551", tax_clade = "Opisthokonta" and tax_phylum = "Hemichordata"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Hemichordata · 2 ✖

tax_kingdom 1

tax_clade 1

  • Opisthokonta · 2 ✖

bioproject 1

  • PRJNA1047551 · 2 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
9102191 9102191 PRJNA1047551_S_NODE_3248_length_258_cov_2.914798_g3121_i0 PRJNA1047551 3248 258 2.9147979999999998 7.52017884 Stereobalanus canadensis 560612 Hemichordata other_Eukaryota 58.4 5.05e-4   NTclustered gi|1535788915|ref|NC_040107.1| 560612 g3121 i0 94.737 0.437984496124031 38 1 15 1 86 123 1385 1349 Stereobalanus canadensis mitochondrion, complete genome blastn 113 58.4 1 Eukaryota Opisthokonta Metazoa Hemichordata Enteropneusta   Harrimaniidae Stereobalanus Stereobalanus canadensis
28014619 28014619 PRJNA1047551_S_NODE_6625_length_194_cov_3.993711_g6498_i0 PRJNA1047551 6625 194 3.993711 7.74779934 Ptychodera flava 63121 Hemichordata other_Eukaryota 74.7 1.98e-14   NR XP_070535624.1 63121 g6498 i0 81.6 6.78865979381443 49 9 75.8 0 6 152 174 222 XP_070535624.1 nascent polypeptide-associated complex subunit alpha-like isoform X4 [Ptychodera flava] diamond 1317 74.7 1 Eukaryota Opisthokonta Metazoa Hemichordata Enteropneusta   Ptychoderidae Ptychodera Ptychodera flava

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;