RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA1047551" and tax_clade = "Metamonada"

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tax_phylum 2

analysis 2

tax_superkingdom 1

tax_clade 1

  • Metamonada · 2 ✖

bioproject 1

  • PRJNA1047551 · 2 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
23126852 23126852 PRJNA1047551_S_NODE_2139_length_308_cov_19.523810_g2012_i0 PRJNA1047551 2139 308 19.52381 60.1333348 Monocercomonoides exilis 2049356 Preaxostyla other_Eukaryota 54.7 0.008   NTclustered gi|2794979231|ref|XM_067863632.1| 2049356 g2012 i0 100 0.912337662337662 29 0 9 0 198 226 6316 6288 Monocercomonoides exilis uncharacterized protein (MONOS_11126), mRNA blastn 281 54.7 1 Eukaryota Metamonada   Preaxostyla   Oxymonadida Polymastigidae Monocercomonoides Monocercomonoides exilis
32438308 32438308 PRJNA1047551_S_NODE_10779_length_163_cov_1.898438_g10652_i0 PRJNA1047551 10779 163 1.898438 3.09445394 Histomonas meleagridis 135588 Parabasalia other_Eukaryota 49.3 4.2e-5   NR XP_067775612.1 135588 g10652 i0 65.7 0.644171779141104 35 12 64.4 0 157 53 171 205 XP_067775612.1 uncharacterized protein GO595_004074 [Histomonas meleagridis] diamond 105 49.3 1 Eukaryota Metamonada   Parabasalia   Tritrichomonadida Dientamoebidae Histomonas Histomonas meleagridis

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;