RNAquarium Metadata Server
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contig_metadata

3 rows where bioproject = "PRJNA1047321" and tax_clade = "Bacteria candidate phyla"

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tax_superkingdom 1

tax_clade 1

  • Bacteria candidate phyla · 3 ✖

bioproject 1

  • PRJNA1047321 · 3 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
11652978 11652978 PRJNA1047321_P_NODE_7330_length_247_cov_0.885057_g7159_i0 PRJNA1047321 7330 247 0.885057 2.18609079 Candidatus Saccharimonadales bacterium 2973664 Bacteria Bacteria 127 6.66e-32   NR HYH93260.1 2973664 g7159 i0 79.3 0.995951417004049 82 17 99.6 0 2 247 724 805 HYH93260.1 alanine--tRNA ligase [Candidatus Saccharimonadales bacterium] diamond 246 127 1 Bacteria Bacteria candidate phyla   Candidatus Saccharimonadota Candidatus Saccharimonadia Candidatus Saccharimonadales     Candidatus Saccharimonadales bacterium
31394253 31394253 PRJNA1047321_P_NODE_7076_length_248_cov_0.880000_g6905_i0 PRJNA1047321 7076 248 0.88 2.1824 Candidatus Rokuibacteriota bacterium 2053607 Bacteria Bacteria 97.1 1e-22   NR MBI2205502.1 2053607 g6905 i0 90.2 7.875 51 5 61.7 0 247 95 172 222 MBI2205502.1 cyclase family protein [Candidatus Rokuibacteriota bacterium] diamond 1953 97.1 1 Bacteria Bacteria candidate phyla   Candidatus Rokuibacteriota         Candidatus Rokuibacteriota bacterium
32153341 32153341 PRJNA1047321_P_NODE_3818_length_332_cov_1.416988_g3648_i0 PRJNA1047321 3818 332 1.416988 4.70440016 Candidatus Collierbacteria bacterium GW2 2053540 Bacteria Bacteria 45.4 0.00879   NR KKT39711.1 1618391 g3648 i0 34.8 0.623493975903614 69 39 60.5 3 238 38 80 144 KKT39711.1 MAG: Prolipoprotein diacylglyceryl transferase [Candidatus Collierbacteria bacterium GW2011_GWC2_44_13] diamond 207 45.4 1 Bacteria Bacteria candidate phyla   Candidatus Collieribacteriota         Candidatus Collierbacteria bacterium GW2011_GWC2_44_13

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;