RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA1046144" and tax_phylum = "Rotifera"

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tax_superkingdom 1

tax_phylum 1

  • Rotifera · 2 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA1046144 · 2 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
30509194 30509194 PRJNA1046144_P_NODE_47113_length_254_cov_1.556757_g46818_i0 PRJNA1046144 47113 254 1.556757 3.95416278 Didymodactylos carnosus 1234261 Rotifera other_Eukaryota 61.6 9.3e-9   NR CAF1140811.1 1234261 g46818 i0 57.7 1.22834645669291 52 22 61.4 0 99 254 316 367 CAF1140811.1 unnamed protein product [Didymodactylos carnosus] diamond 312 61.6 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Philodinida Philodinidae Didymodactylos Didymodactylos carnosus
32089993 32089993 PRJNA1046144_P_NODE_59798_length_232_cov_2.220859_g59503_i0 PRJNA1046144 59798 232 2.220859 5.15239288 Adineta steineri 433720 Rotifera other_Eukaryota 138 6.62e-36   NR CAF1394073.1 433720 g59503 i0 89.6 3.98275862068966 77 8 99.6 0 2 232 880 956 CAF1394073.1 unnamed protein product [Adineta steineri] diamond 924 138 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Adinetida Adinetidae Adineta Adineta steineri

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;