contig_metadata
9 rows where bioproject = "PRJNA1046144", tax_phylum = "Negarnaviricota" and tax_superkingdom = "Viruses"
This data as json, CSV (advanced)
| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 22686215 | 22686215 | PRJNA1046144_P_NODE_60218_length_232_cov_0.883436_g59923_i0 | PRJNA1046144 | 60218 | 232 | 0.883436 | 2.04957152 | Paramyxoviridae | 11158 | Viruses | Viruses | 429 | 8.2e-116 | NTclustered | gi|2721617856|gb|PP711545.1| | 251774 | g59923 | i0 | 100 | 68.8189655172414 | 232 | 0 | 100 | 0 | 1 | 232 | 2855 | 3086 | Porcine parainfluenza virus isolate PPIV-DX-Gansu-2020, partial genome | blastn | 15966 | 429 | 1 | Viruses | Orthornavirae | Negarnaviricota | Monjiviricetes | Mononegavirales | Paramyxoviridae | Rubulavirus | Porcine parainfluenza virus | ||
| 27856451 | 27856451 | PRJNA1046144_P_NODE_16325_length_399_cov_5.639394_g16030_i0 | PRJNA1046144 | 16325 | 399 | 5.639394 | 22.50118206 | Sinu virus | 1927799 | Viruses | Viruses | 184 | 6.13e-53 | NR | YP_010840496.1 | 1927799 | g16030 | i0 | 60.8 | 0.977443609022556 | 130 | 51 | 97.7 | 0 | 3 | 392 | 360 | 489 | YP_010840496.1 glycoprotein [Sinu virus] | diamond | 390 | 184 | 1 | Viruses | Orthornavirae | Negarnaviricota | Insthoviricetes | Articulavirales | Orthomyxoviridae | Thogotovirus | Thogotovirus sinuense | ||
| 28172220 | 28172220 | PRJNA1046144_P_NODE_65126_length_229_cov_0.900000_g64831_i0 | PRJNA1046144 | 65126 | 229 | 0.9 | 2.061 | Sinu virus | 1927799 | Viruses | Viruses | 114 | 1.4700000000000002e-27 | NR | YP_010840497.1 | 1927799 | g64831 | i0 | 72.4 | 0.995633187772926 | 76 | 21 | 99.6 | 0 | 228 | 1 | 263 | 338 | YP_010840497.1 PB2 polymerase subunit [Sinu virus] | diamond | 228 | 114 | 1 | Viruses | Orthornavirae | Negarnaviricota | Insthoviricetes | Articulavirales | Orthomyxoviridae | Thogotovirus | Thogotovirus sinuense | ||
| 29498341 | 29498341 | PRJNA1046144_P_NODE_39630_length_272_cov_2.128079_g39335_i0 | PRJNA1046144 | 39630 | 272 | 2.128079 | 5.78837488 | Sinu virus | 1927799 | Viruses | Viruses | 155 | 3.0299999999999996e-42 | NR | YP_010840494.1 | 1927799 | g39335 | i0 | 75.6 | 0.992647058823529 | 90 | 22 | 99.3 | 0 | 271 | 2 | 543 | 632 | YP_010840494.1 PA polymerase subunit [Sinu virus] | diamond | 270 | 155 | 1 | Viruses | Orthornavirae | Negarnaviricota | Insthoviricetes | Articulavirales | Orthomyxoviridae | Thogotovirus | Thogotovirus sinuense | ||
| 29561376 | 29561376 | PRJNA1046144_P_NODE_2710_length_929_cov_10.017442_g2501_i0 | PRJNA1046144 | 2710 | 929 | 10.017442 | 93.06203618 | Sinu virus | 1927799 | Viruses | Viruses | 297 | 5.59e-97 | NR | YP_010840498.1 | 1927799 | g2501 | i0 | 53.9 | 0.8751345532831 | 271 | 123 | 86.9 | 1 | 901 | 95 | 1 | 271 | YP_010840498.1 ML [Sinu virus] | diamond | 813 | 297 | 1 | Viruses | Orthornavirae | Negarnaviricota | Insthoviricetes | Articulavirales | Orthomyxoviridae | Thogotovirus | Thogotovirus sinuense | ||
| 29782533 | 29782533 | PRJNA1046144_P_NODE_22951_length_343_cov_1.576642_g22656_i0 | PRJNA1046144 | 22951 | 343 | 1.576642 | 5.40788206 | Sinu virus | 1927799 | Viruses | Viruses | 175 | 8.86e-49 | NR | YP_010840499.1 | 1927799 | g22656 | i0 | 76.1 | 0.988338192419825 | 113 | 27 | 98.8 | 0 | 3 | 341 | 125 | 237 | YP_010840499.1 PB1 protein [Sinu virus] | diamond | 339 | 175 | 1 | Viruses | Orthornavirae | Negarnaviricota | Insthoviricetes | Articulavirales | Orthomyxoviridae | Thogotovirus | Thogotovirus sinuense | ||
| 31520733 | 31520733 | PRJNA1046144_P_NODE_55616_length_235_cov_2.572289_g55321_i0 | PRJNA1046144 | 55616 | 235 | 2.572289 | 6.04487915 | Sinu virus | 1927799 | Viruses | Viruses | 58.9 | 6.66e-8 | NR | YP_010840494.1 | 1927799 | g55321 | i0 | 47.1 | 0.868085106382979 | 68 | 34 | 85.5 | 2 | 34 | 234 | 109 | 175 | YP_010840494.1 PA polymerase subunit [Sinu virus] | diamond | 204 | 58.9 | 1 | Viruses | Orthornavirae | Negarnaviricota | Insthoviricetes | Articulavirales | Orthomyxoviridae | Thogotovirus | Thogotovirus sinuense | ||
| 31836675 | 31836675 | PRJNA1046144_P_NODE_44777_length_259_cov_3.989474_g44482_i0 | PRJNA1046144 | 44777 | 259 | 3.989474 | 10.33273766 | Sinu virus | 1927799 | Viruses | Viruses | 74.3 | 3.38e-13 | NR | YP_010840496.1 | 1927799 | g44482 | i0 | 50 | 0.833976833976834 | 72 | 32 | 81.1 | 2 | 211 | 2 | 7 | 76 | YP_010840496.1 glycoprotein [Sinu virus] | diamond | 216 | 74.3 | 1 | Viruses | Orthornavirae | Negarnaviricota | Insthoviricetes | Articulavirales | Orthomyxoviridae | Thogotovirus | Thogotovirus sinuense | ||
| 31836686 | 31836686 | PRJNA1046144_P_NODE_7777_length_565_cov_2.322581_g7485_i0 | PRJNA1046144 | 7777 | 565 | 2.322581 | 13.12258265 | Sinu virus | 1927799 | Viruses | Viruses | 150 | 1.9e-39 | NR | YP_010840496.1 | 1927799 | g7485 | i0 | 41.1 | 2.03362831858407 | 185 | 105 | 96.6 | 2 | 20 | 565 | 203 | 386 | YP_010840496.1 glycoprotein [Sinu virus] | diamond | 1149 | 150 | 1 | Viruses | Orthornavirae | Negarnaviricota | Insthoviricetes | Articulavirales | Orthomyxoviridae | Thogotovirus | Thogotovirus sinuense |
Advanced export
JSON shape: default, array, newline-delimited
CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;