RNAquarium Metadata Server
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contig_metadata

3 rows where bioproject = "PRJNA1046144" and tax_phylum = "Duplornaviricota"

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tax_superkingdom 1

tax_phylum 1

  • Duplornaviricota · 3 ✖

tax_kingdom 1

bioproject 1

  • PRJNA1046144 · 3 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
28835332 28835332 PRJNA1046144_P_NODE_54268_length_238_cov_1.704142_g53973_i0 PRJNA1046144 54268 238 1.704142 4.05585796 Reoviridae sp. 2585267 Viruses Viruses 118 1.02e-28   NR WWV87256.1 2585267 g53973 i0 68.4 0.995798319327731 79 25 99.6 0 238 2 810 888 WWV87256.1 MAG: RNA-dependent RNA polymerase [Reoviridae sp.] diamond 237 118 1 Viruses   Orthornavirae Duplornaviricota Resentoviricetes Reovirales     Reoviridae sp.
29119739 29119739 PRJNA1046144_P_NODE_70489_length_223_cov_2.266234_g70194_i0 PRJNA1046144 70489 223 2.266234 5.05370182 Reoviridae sp. 2585267 Viruses Viruses 91.3 2.4e-19   NR WWV87256.1 2585267 g70194 i0 59.5 1.97757847533632 74 30 99.6 0 1 222 638 711 WWV87256.1 MAG: RNA-dependent RNA polymerase [Reoviridae sp.] diamond 441 91.3 1 Viruses   Orthornavirae Duplornaviricota Resentoviricetes Reovirales     Reoviridae sp.
31520735 31520735 PRJNA1046144_P_NODE_57096_length_234_cov_2.048485_g56801_i0 PRJNA1046144 57096 234 2.048485 4.7934549 Reoviridae sp. 2585267 Viruses Viruses 103 9.379999999999999e-24   NR WWV87256.1 2585267 g56801 i0 64.9 0.987179487179487 77 27 98.7 0 232 2 734 810 WWV87256.1 MAG: RNA-dependent RNA polymerase [Reoviridae sp.] diamond 231 103 1 Viruses   Orthornavirae Duplornaviricota Resentoviricetes Reovirales     Reoviridae sp.

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;