contig_metadata
11 rows where bioproject = "PRJNA1046144", tax_kingdom = "Pseudomonadati" and tax_phylum = "Bdellovibrionota"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 5275122 | 5275122 | PRJNA1046144_P_NODE_39925_length_271_cov_3.579208_g39630_i0 | PRJNA1046144 | 39925 | 271 | 3.579208 | 9.69965368 | Bacteriovoracaceae bacterium | 2081706 | Bacteria | Bacteria | 196 | 1.08e-45 | NTclustered | gi|2907625691|emb|OZ223251.1| | 2081706 | g39630 | i0 | 82.96 | 23.7859778597786 | 223 | 32 | 81 | 5 | 41 | 260 | 90929 | 90710 | MAG: Bacteriovoracaceae bacterium isolate 56684ba0-df17-47c9-bcf5-ee076427a4fa genome assembly, chromosome: 1 | blastn | 6446 | 196 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bacteriovoracia | Bacteriovoracales | Bacteriovoracaceae | Bacteriovoracaceae bacterium | |||
| 7824865 | 7824865 | PRJNA1046144_P_NODE_37527_length_279_cov_1.371429_g37232_i0 | PRJNA1046144 | 37527 | 279 | 1.371429 | 3.82628691 | Bdellovibrio sp. qaytius | 1916293 | Bacteria | Bacteria | 230 | 1.1099999999999995e-55 | NTclustered | gi|1552089877|gb|CP025734.1| | 1916293 | g37232 | i0 | 81.915 | 55.3799283154122 | 282 | 42 | 99 | 5 | 2 | 279 | 665905 | 665629 | Bdellovibrio sp. qaytius chromosome, complete genome | blastn | 15451 | 230 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bdellovibrionia | Bdellovibrionales | Pseudobdellovibrionaceae | Bdellovibrio | Bdellovibrio sp. qaytius | ||
| 23124546 | 23124546 | PRJNA1046144_P_NODE_38339_length_276_cov_2.062802_g38044_i0 | PRJNA1046144 | 38339 | 276 | 2.062802 | 5.69333352 | Pseudobdellovibrionaceae bacterium | 2026715 | Bacteria | Bacteria | 196 | 1.11e-45 | NTclustered | gi|2258818259|gb|CP060220.1| | 2026715 | g38044 | i0 | 80.989 | 80.9057971014493 | 263 | 37 | 93 | 12 | 21 | 276 | 3251502 | 3251758 | MAG: Pseudobdellovibrionaceae bacterium isolate HK-STAS-BDEL-7 chromosome | blastn | 22330 | 196 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bdellovibrionia | Bdellovibrionales | Pseudobdellovibrionaceae | Pseudobdellovibrionaceae bacterium | |||
| 27572349 | 27572349 | PRJNA1046144_P_NODE_65564_length_229_cov_0.900000_g65269_i0 | PRJNA1046144 | 65564 | 229 | 0.9 | 2.061 | Bacteriovoracaceae bacterium | 2081706 | Bacteria | Bacteria | 95.9 | 2.45e-21 | NR | MFA5584750.1 | 2081706 | g65269 | i0 | 67.2 | 2.63318777292576 | 67 | 21 | 87.8 | 1 | 201 | 1 | 1 | 66 | MFA5584750.1 ABC transporter transmembrane domain-containing protein [Bacteriovoracaceae bacterium] | diamond | 603 | 95.9 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bacteriovoracia | Bacteriovoracales | Bacteriovoracaceae | Bacteriovoracaceae bacterium | |||
| 28140963 | 28140963 | PRJNA1046144_P_NODE_57245_length_234_cov_1.636364_g56950_i0 | PRJNA1046144 | 57245 | 234 | 1.636364 | 3.82909176 | Bdellovibrionota bacterium | 3034175 | Bacteria | Bacteria | 78.2 | 1.07e-14 | NR | MES2857009.1 | 3034175 | g56950 | i0 | 54.1 | 1.85897435897436 | 74 | 34 | 94.9 | 0 | 224 | 3 | 1 | 74 | MES2857009.1 M3 family metallopeptidase [Bdellovibrionota bacterium] | diamond | 435 | 78.2 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bdellovibrionota bacterium | ||||||
| 29214484 | 29214484 | PRJNA1046144_P_NODE_56909_length_235_cov_0.867470_g56614_i0 | PRJNA1046144 | 56909 | 235 | 0.86747 | 2.0385545 | Bdellovibrio bacteriovorus | 959 | Bacteria | Bacteria | 70.1 | 6.76e-12 | NR | WP_011165300.1 | 959 | g56614 | i0 | 60.4 | 2.13191489361702 | 53 | 21 | 67.7 | 0 | 28 | 186 | 319 | 371 | WP_011165300.1 AGE family epimerase/isomerase [Bdellovibrio bacteriovorus] | diamond | 501 | 70.1 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bdellovibrionia | Bdellovibrionales | Pseudobdellovibrionaceae | Bdellovibrio | Bdellovibrio bacteriovorus | ||
| 29308867 | 29308867 | PRJNA1046144_P_NODE_68629_length_227_cov_0.911392_g68334_i0 | PRJNA1046144 | 68629 | 227 | 0.911392 | 2.06885984 | Bdellovibrionota bacterium | 3034175 | Bacteria | Bacteria | 101 | 8.04e-25 | NR | MEK7356618.1 | 3034175 | g68334 | i0 | 62.7 | 0.991189427312775 | 75 | 28 | 99.1 | 0 | 227 | 3 | 97 | 171 | MEK7356618.1 BamA/TamA family outer membrane protein [Bdellovibrionota bacterium] | diamond | 225 | 101 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bdellovibrionota bacterium | ||||||
| 30003776 | 30003776 | PRJNA1046144_P_NODE_70791_length_220_cov_2.834437_g70496_i0 | PRJNA1046144 | 70791 | 220 | 2.834437 | 6.2357614 | Bdellovibrionota bacterium | 3034175 | Bacteria | Bacteria | 121 | 4.86e-30 | NR | HEY8278246.1 | 3034175 | g70496 | i0 | 86.3 | 0.995454545454545 | 73 | 10 | 99.5 | 0 | 219 | 1 | 308 | 380 | HEY8278246.1 methionine synthase [Bdellovibrionota bacterium] | diamond | 219 | 121 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bdellovibrionota bacterium | ||||||
| 30983295 | 30983295 | PRJNA1046144_P_NODE_61374_length_231_cov_1.777778_g61079_i0 | PRJNA1046144 | 61374 | 231 | 1.777778 | 4.10666718 | Pseudobdellovibrionaceae bacterium | 2026715 | Bacteria | Bacteria | 108 | 2.01e-26 | NR | MCM2280836.1 | 2026715 | g61079 | i0 | 67.1 | 1.97402597402597 | 76 | 25 | 98.7 | 0 | 3 | 230 | 160 | 235 | MCM2280836.1 esterase family protein [Pseudobdellovibrionaceae bacterium] | diamond | 456 | 108 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bdellovibrionia | Bdellovibrionales | Pseudobdellovibrionaceae | Pseudobdellovibrionaceae bacterium | |||
| 31931674 | 31931674 | PRJNA1046144_P_NODE_55817_length_235_cov_1.656627_g55522_i0 | PRJNA1046144 | 55817 | 235 | 1.656627 | 3.89307345 | Bdellovibrionales bacterium | 2053517 | Bacteria | Bacteria | 88.2 | 9.14e-20 | NR | MCB0407745.1 | 2053517 | g55522 | i0 | 61.3 | 0.791489361702128 | 62 | 24 | 79.1 | 0 | 6 | 191 | 109 | 170 | MCB0407745.1 Hsp20/alpha crystallin family protein [Bdellovibrionales bacterium] | diamond | 186 | 88.2 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bdellovibrionia | Bdellovibrionales | Bdellovibrionales bacterium | ||||
| 32438294 | 32438294 | PRJNA1046144_P_NODE_70059_length_226_cov_0.917197_g69764_i0 | PRJNA1046144 | 70059 | 226 | 0.917197 | 2.07286522 | Peredibacter starrii | 28202 | Bacteria | Bacteria | 56.6 | 3.65e-7 | NR | WP_321399652.1 | 28202 | g69764 | i0 | 44.1 | 0.902654867256637 | 68 | 38 | 90.3 | 0 | 205 | 2 | 182 | 249 | WP_321399652.1 cation:proton antiporter [Peredibacter starrii] | diamond | 204 | 56.6 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bacteriovoracia | Bacteriovoracales | Bacteriovoracaceae | Peredibacter | Peredibacter starrii |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;