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contig_metadata

17 rows where bioproject = "PRJNA1046144" and tax_kingdom = "Orthornavirae"

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tax_superkingdom 1

tax_kingdom 1

  • Orthornavirae · 17 ✖

bioproject 1

  • PRJNA1046144 · 17 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
4837299 4837299 PRJNA1046144_P_NODE_4_length_6415_cov_243.468327_g3_i0 PRJNA1046144 4 6415 243.468327 15618.49317705 root 1 Root_unresolved Root_unresolved 11566 0   NTclustered gi|388240129|emb|HE818411.1| 12242 g3 i0 99.559 99.8254091971941 6347 28 100 0 69 6415 6386 40 Tobacco mosaic virus isolate Changle-9, complete genome blastn 640380 11566 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Martellivirales Virgaviridae Tobamovirus Tobamovirus tabaci
6550734 6550734 PRJNA1046144_P_NODE_59686_length_233_cov_0.878049_g59391_i0 PRJNA1046144 59686 233 0.878049 2.04585417 Betacoronavirus pandemicum 3418604 Viruses Viruses 425 1.07e-114   NTclustered gi|2161743781|gb|OL761638.1| 2697049 g59391 i0 99.571 100 233 1 100 0 1 233 28707 28939 Severe acute respiratory syndrome coronavirus 2 isolate SARS-CoV-2/human/USA/AZ-CDC-ASC210483568/2021, complete genome blastn 23300 425 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Nidovirales Coronaviridae Betacoronavirus Betacoronavirus pandemicum
15475349 15475349 PRJNA1046144_P_NODE_52193_length_243_cov_1.367816_g51898_i0 PRJNA1046144 52193 243 1.367816 3.32379288 Chronazanb virus 3129852 Viruses Viruses 141 4.54e-29   NTclustered gi|2717318485|gb|PP172249.1| 3129852 g51898 i0 95.455 6.57201646090535 88 4 36 0 147 234 4398 4485 MAG: Chronazanb virus isolate CN1B_k141_35798 genomic sequence blastn 1597 141 1 Viruses   Orthornavirae Lenarviricota Leviviricetes       Chronazanb virus
18024007 18024007 PRJNA1046144_P_NODE_355_length_2008_cov_3.012378_g328_i0 PRJNA1046144 355 2008 3.012378 60.48855024 Iflavirus sp. 1916690 Viruses Viruses 1147 0   NTclustered gi|2895513769|tpg|BK068505.1| 1916690 g328 i0 79.462 23.7001992031872 1636 322 81 12 319 1947 10102 11730 TPA_asm: Iflavirus sp. isolate WUR34 polyprotein gene, complete cds blastn 47590 1147 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales Iflaviridae Iflavirus Iflavirus sp.
22686215 22686215 PRJNA1046144_P_NODE_60218_length_232_cov_0.883436_g59923_i0 PRJNA1046144 60218 232 0.883436 2.04957152 Paramyxoviridae 11158 Viruses Viruses 429 8.2e-116   NTclustered gi|2721617856|gb|PP711545.1| 251774 g59923 i0 100 68.8189655172414 232 0 100 0 1 232 2855 3086 Porcine parainfluenza virus isolate PPIV-DX-Gansu-2020, partial genome blastn 15966 429 1 Viruses   Orthornavirae Negarnaviricota Monjiviricetes Mononegavirales Paramyxoviridae Rubulavirus Porcine parainfluenza virus
27856451 27856451 PRJNA1046144_P_NODE_16325_length_399_cov_5.639394_g16030_i0 PRJNA1046144 16325 399 5.639394 22.50118206 Sinu virus 1927799 Viruses Viruses 184 6.13e-53   NR YP_010840496.1 1927799 g16030 i0 60.8 0.977443609022556 130 51 97.7 0 3 392 360 489 YP_010840496.1 glycoprotein [Sinu virus] diamond 390 184 1 Viruses   Orthornavirae Negarnaviricota Insthoviricetes Articulavirales Orthomyxoviridae Thogotovirus Thogotovirus sinuense
28172220 28172220 PRJNA1046144_P_NODE_65126_length_229_cov_0.900000_g64831_i0 PRJNA1046144 65126 229 0.9 2.061 Sinu virus 1927799 Viruses Viruses 114 1.4700000000000002e-27   NR YP_010840497.1 1927799 g64831 i0 72.4 0.995633187772926 76 21 99.6 0 228 1 263 338 YP_010840497.1 PB2 polymerase subunit [Sinu virus] diamond 228 114 1 Viruses   Orthornavirae Negarnaviricota Insthoviricetes Articulavirales Orthomyxoviridae Thogotovirus Thogotovirus sinuense
28835332 28835332 PRJNA1046144_P_NODE_54268_length_238_cov_1.704142_g53973_i0 PRJNA1046144 54268 238 1.704142 4.05585796 Reoviridae sp. 2585267 Viruses Viruses 118 1.02e-28   NR WWV87256.1 2585267 g53973 i0 68.4 0.995798319327731 79 25 99.6 0 238 2 810 888 WWV87256.1 MAG: RNA-dependent RNA polymerase [Reoviridae sp.] diamond 237 118 1 Viruses   Orthornavirae Duplornaviricota Resentoviricetes Reovirales     Reoviridae sp.
29119739 29119739 PRJNA1046144_P_NODE_70489_length_223_cov_2.266234_g70194_i0 PRJNA1046144 70489 223 2.266234 5.05370182 Reoviridae sp. 2585267 Viruses Viruses 91.3 2.4e-19   NR WWV87256.1 2585267 g70194 i0 59.5 1.97757847533632 74 30 99.6 0 1 222 638 711 WWV87256.1 MAG: RNA-dependent RNA polymerase [Reoviridae sp.] diamond 441 91.3 1 Viruses   Orthornavirae Duplornaviricota Resentoviricetes Reovirales     Reoviridae sp.
29214471 29214471 PRJNA1046144_P_NODE_289_length_2131_cov_3.489816_g266_i0 PRJNA1046144 289 2131 3.489816 74.36797896 Guiyang narnavirus 1 2905332 Viruses Viruses 479 4.16e-156   NR UHR49782.1 2905332 g266 i0 39.9 1.0361332707649 736 378 98.7 16 2106 4 3 709 UHR49782.1 MAG: RNA-dependent RNA polymerase, partial [Guiyang narnavirus 1] diamond 2208 479 1 Viruses   Orthornavirae Lenarviricota Amabiliviricetes Wolframvirales Narnaviridae Narnavirus Guiyang narnavirus 1
29498341 29498341 PRJNA1046144_P_NODE_39630_length_272_cov_2.128079_g39335_i0 PRJNA1046144 39630 272 2.128079 5.78837488 Sinu virus 1927799 Viruses Viruses 155 3.0299999999999996e-42   NR YP_010840494.1 1927799 g39335 i0 75.6 0.992647058823529 90 22 99.3 0 271 2 543 632 YP_010840494.1 PA polymerase subunit [Sinu virus] diamond 270 155 1 Viruses   Orthornavirae Negarnaviricota Insthoviricetes Articulavirales Orthomyxoviridae Thogotovirus Thogotovirus sinuense
29561376 29561376 PRJNA1046144_P_NODE_2710_length_929_cov_10.017442_g2501_i0 PRJNA1046144 2710 929 10.017442 93.06203618 Sinu virus 1927799 Viruses Viruses 297 5.59e-97   NR YP_010840498.1 1927799 g2501 i0 53.9 0.8751345532831 271 123 86.9 1 901 95 1 271 YP_010840498.1 ML [Sinu virus] diamond 813 297 1 Viruses   Orthornavirae Negarnaviricota Insthoviricetes Articulavirales Orthomyxoviridae Thogotovirus Thogotovirus sinuense
29782533 29782533 PRJNA1046144_P_NODE_22951_length_343_cov_1.576642_g22656_i0 PRJNA1046144 22951 343 1.576642 5.40788206 Sinu virus 1927799 Viruses Viruses 175 8.86e-49   NR YP_010840499.1 1927799 g22656 i0 76.1 0.988338192419825 113 27 98.8 0 3 341 125 237 YP_010840499.1 PB1 protein [Sinu virus] diamond 339 175 1 Viruses   Orthornavirae Negarnaviricota Insthoviricetes Articulavirales Orthomyxoviridae Thogotovirus Thogotovirus sinuense
31520733 31520733 PRJNA1046144_P_NODE_55616_length_235_cov_2.572289_g55321_i0 PRJNA1046144 55616 235 2.572289 6.04487915 Sinu virus 1927799 Viruses Viruses 58.9 6.66e-8   NR YP_010840494.1 1927799 g55321 i0 47.1 0.868085106382979 68 34 85.5 2 34 234 109 175 YP_010840494.1 PA polymerase subunit [Sinu virus] diamond 204 58.9 1 Viruses   Orthornavirae Negarnaviricota Insthoviricetes Articulavirales Orthomyxoviridae Thogotovirus Thogotovirus sinuense
31520735 31520735 PRJNA1046144_P_NODE_57096_length_234_cov_2.048485_g56801_i0 PRJNA1046144 57096 234 2.048485 4.7934549 Reoviridae sp. 2585267 Viruses Viruses 103 9.379999999999999e-24   NR WWV87256.1 2585267 g56801 i0 64.9 0.987179487179487 77 27 98.7 0 232 2 734 810 WWV87256.1 MAG: RNA-dependent RNA polymerase [Reoviridae sp.] diamond 231 103 1 Viruses   Orthornavirae Duplornaviricota Resentoviricetes Reovirales     Reoviridae sp.
31836675 31836675 PRJNA1046144_P_NODE_44777_length_259_cov_3.989474_g44482_i0 PRJNA1046144 44777 259 3.989474 10.33273766 Sinu virus 1927799 Viruses Viruses 74.3 3.38e-13   NR YP_010840496.1 1927799 g44482 i0 50 0.833976833976834 72 32 81.1 2 211 2 7 76 YP_010840496.1 glycoprotein [Sinu virus] diamond 216 74.3 1 Viruses   Orthornavirae Negarnaviricota Insthoviricetes Articulavirales Orthomyxoviridae Thogotovirus Thogotovirus sinuense
31836686 31836686 PRJNA1046144_P_NODE_7777_length_565_cov_2.322581_g7485_i0 PRJNA1046144 7777 565 2.322581 13.12258265 Sinu virus 1927799 Viruses Viruses 150 1.9e-39   NR YP_010840496.1 1927799 g7485 i0 41.1 2.03362831858407 185 105 96.6 2 20 565 203 386 YP_010840496.1 glycoprotein [Sinu virus] diamond 1149 150 1 Viruses   Orthornavirae Negarnaviricota Insthoviricetes Articulavirales Orthomyxoviridae Thogotovirus Thogotovirus sinuense

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;