RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA1046144", tax_clade = "Opisthokonta" and tax_phylum = "Porifera"

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tax_superkingdom 1

tax_phylum 1

  • Porifera · 2 ✖

tax_kingdom 1

tax_clade 1

  • Opisthokonta · 2 ✖

bioproject 1

  • PRJNA1046144 · 2 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
7825139 7825139 PRJNA1046144_P_NODE_50947_length_245_cov_6.494318_g50652_i0 PRJNA1046144 50947 245 6.494318 15.9110791 Topsentia sp. P126 1346764 Porifera other_Eukaryota 180 9.72e-41   NTclustered gi|513134575|gb|KC884837.1| 1346764 g50652 i0 80.328 99.2979591836735 244 43 99 5 3 245 1625 1386 Topsentia sp. P126 28S ribosomal RNA gene, partial sequence blastn 24328 180 1 Eukaryota Opisthokonta Metazoa Porifera Demospongiae Suberitida Halichondriidae Topsentia Topsentia sp. P126
12488036 12488036 PRJNA1046144_P_NODE_37110_length_280_cov_2.042654_g36815_i0 PRJNA1046144 37110 280 2.042654 5.7194312 Porifera 6040 Porifera other_Eukaryota 215 3.11e-51   NTclustered gi|512765385|gb|KC869623.1| 375146 g36815 i0 81.206 97.6035714285714 282 40 100 9 1 280 1391 1121 Ianthella basta voucher NCI067 28S ribosomal RNA gene, partial sequence blastn 27329 215 1 Eukaryota Opisthokonta Metazoa Porifera Demospongiae Verongiida Ianthellidae Ianthella Ianthella basta

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;