RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA1046144", tax_clade = "Amoebozoa" and tax_phylum = "Evosea"

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tax_superkingdom 1

tax_phylum 1

  • Evosea · 2 ✖

tax_clade 1

  • Amoebozoa · 2 ✖

bioproject 1

  • PRJNA1046144 · 2 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
14201205 14201205 PRJNA1046144_P_NODE_50632_length_246_cov_1.807910_g50337_i0 PRJNA1046144 50632 246 1.80791 4.4474586 Fuligo septica 159720 Evosea other_Eukaryota 211 3.46e-50   NTclustered gi|37515398|emb|AJ584697.1| 159720 g50337 i0 94.203 2.13821138211382 138 8 56 0 31 168 13866 14003 Fuligo septica 18S rRNA gene, ITS1, 5.8S rRNA gene, ITS2 and 28S rRNA gene, isolate NY-1 blastn 526 211 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Physariida Physaraceae Fuligo Fuligo septica
21849131 21849131 PRJNA1046144_P_NODE_36858_length_281_cov_1.778302_g36563_i0 PRJNA1046144 36858 281 1.778302 4.99702862 Dictydiaethalium plumbeum 1334544 Evosea other_Eukaryota 231 3.0999999999999994e-56   NTclustered gi|501417077|gb|JX481291.1| 1334544 g36563 i0 83.534 85.1423487544484 249 39 88 2 34 281 1377 1624 Dictydiaethalium plumbeum voucher AMFD185 18S ribosomal RNA gene, partial sequence blastn 23925 231 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Liceales Dictydiaethaliaceae Dictydiaethalium Dictydiaethalium plumbeum

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;