RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA1044115" and tax_phylum = "Bacillariophyta"

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tax_superkingdom 1

tax_phylum 1

  • Bacillariophyta · 2 ✖

tax_clade 1

bioproject 1

  • PRJNA1044115 · 2 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27351551 27351551 PRJNA1044115_P_NODE_36283_length_250_cov_0.881356_g36099_i0 PRJNA1044115 36283 250 0.881356 2.20339 Bacillariaceae sp. 3061772 SAR_Eukaryotes SAR_Eukaryotes 72 1.99e-12   NR KAL3916292.1 3061772 g36099 i0 46.5 1.032 86 41 97.2 1 2 244 103 188 KAL3916292.1 MAG: hypothetical protein SGILL_005242, partial [Bacillariaceae sp.] diamond 258 72 1 Eukaryota Sar   Bacillariophyta Bacillariophyceae Bacillariales Bacillariaceae   Bacillariaceae sp.
30572133 30572133 PRJNA1044115_P_NODE_35293_length_251_cov_0.876404_g35109_i0 PRJNA1044115 35293 251 0.876404 2.19977404 Bacillariaceae sp. 3061772 SAR_Eukaryotes SAR_Eukaryotes 70.5 7.04e-12   NR KAL3924535.1 3061772 g35109 i0 41.5 1.93625498007968 82 47 96.8 1 1 243 644 725 KAL3924535.1 MAG: hypothetical protein SGILL_000986 [Bacillariaceae sp.] diamond 486 70.5 1 Eukaryota Sar   Bacillariophyta Bacillariophyceae Bacillariales Bacillariaceae   Bacillariaceae sp.

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;