RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA1044115", tax_kingdom = "Metazoa" and tax_phylum = "Hemichordata"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Hemichordata · 2 ✖

tax_kingdom 1

  • Metazoa · 2 ✖

tax_clade 1

bioproject 1

  • PRJNA1044115 · 2 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
23123566 23123566 PRJNA1044115_P_NODE_20839_length_319_cov_2.024390_g20655_i0 PRJNA1044115 20839 319 2.02439 6.4578041 Ptychodera flava 63121 Hemichordata other_Eukaryota 268 2.7299999999999998e-67   NTclustered gi|2875720668|ref|XM_070678788.1| 63121 g20655 i0 83.219 30.0940438871473 292 49 92 0 20 311 114 405 PREDICTED: Ptychodera flava tubulin beta chain-like (LOC139116217), mRNA blastn 9600 268 1 Eukaryota Opisthokonta Metazoa Hemichordata Enteropneusta   Ptychoderidae Ptychodera Ptychodera flava
29655822 29655822 PRJNA1044115_P_NODE_41930_length_242_cov_0.923077_g41746_i0 PRJNA1044115 41930 242 0.923077 2.23384634 Saccoglossus kowalevskii 10224 Hemichordata other_Eukaryota 52.4 1.51e-5   NR XP_006826086.1 10224 g41746 i0 48.1 0.644628099173554 52 27 64.5 0 206 51 1112 1163 XP_006826086.1 PREDICTED: uncharacterized protein LOC102808992 [Saccoglossus kowalevskii] diamond 156 52.4 1 Eukaryota Opisthokonta Metazoa Hemichordata Enteropneusta   Harrimaniidae Saccoglossus Saccoglossus kowalevskii

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;