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contig_metadata

25 rows where bioproject = "PRJNA1044115" and tax_clade = "Sar"

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analysis 2

tax_superkingdom 1

tax_clade 1

  • Sar · 25 ✖

bioproject 1

  • PRJNA1044115 · 25 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
1008785 1008785 PRJNA1044115_P_NODE_23101_length_302_cov_2.912664_g22917_i0 PRJNA1044115 23101 302 2.912664 8.79624528 Peronosporomycetes 3418804 SAR_Eukaryotes SAR_Eukaryotes 472 1.82e-128   NTclustered gi|2651589115|gb|PP108238.1| 4785 g22917 i0 95.033 103.029801324503 302 12 100 3 1 302 23124 23422 Phytophthora cinnamomi strain CT09CHAP1 mitochondrion, complete genome blastn 31115 472 1 Eukaryota Sar   Oomycota Peronosporomycetes Peronosporales Peronosporaceae Phytophthora Phytophthora cinnamomi
2284023 2284023 PRJNA1044115_P_NODE_16742_length_357_cov_4.904930_g16558_i0 PRJNA1044115 16742 357 4.90493 17.5106001 Tetrahymena 5890 SAR_Eukaryotes SAR_Eukaryotes 287 8.51e-73   NTclustered gi|161736|gb|L01416.1|TETBTUBUB 5911 g16558 i0 83.495 61.7422969187675 309 50 86 1 6 313 438 130 Tetrahymena thermophila beta-tubulin (BTU2) gene, complete cds blastn 22042 287 1 Eukaryota Sar   Ciliophora Oligohymenophorea Hymenostomatida Tetrahymenidae Tetrahymena Tetrahymena thermophila
6549245 6549245 PRJNA1044115_P_NODE_13346_length_405_cov_5.253012_g13162_i0 PRJNA1044115 13346 405 5.253012 21.2746986 Tetrahymena pyriformis 5908 SAR_Eukaryotes SAR_Eukaryotes 732 0   NTclustered gi|10782|emb|X54004.1| 5908 g13162 i0 99.259 90.4074074074074 405 3 100 0 1 405 1918 1514 Tetrahymena pyriformis gene for 26S large subunit ribosomal RNA blastn 36615 732 1 Eukaryota Sar   Ciliophora Oligohymenophorea Hymenostomatida Tetrahymenidae Tetrahymena Tetrahymena pyriformis
7824130 7824130 PRJNA1044115_P_NODE_31007_length_264_cov_1.633508_g30823_i0 PRJNA1044115 31007 264 1.633508 4.31246112 Pyrocystis lunula 2972 SAR_Eukaryotes SAR_Eukaryotes 377 3.4999999999999996e-100   NTclustered gi|27450758|gb|AF508263.1| 2972 g30823 i0 92.424 99.3030303030303 264 20 100 0 1 264 741 1004 Pyrocystis lunula actin mRNA, complete cds blastn 26216 377 1 Eukaryota Sar     Dinophyceae Gonyaulacales Pyrocystaceae Pyrocystis Pyrocystis lunula
8662022 8662022 PRJNA1044115_P_NODE_8547_length_524_cov_104.949002_g8365_i0 PRJNA1044115 8547 524 104.949002 549.93277048 Euplotes 5935 SAR_Eukaryotes SAR_Eukaryotes 963 0   NTclustered gi|1516250946|gb|MK177633.1| 343864 g8365 i0 99.809 101.030534351145 524 1 100 0 1 524 603 1126 Uncultured Euplotes sp. clone DDI217.fa small subunit ribosomal RNA gene, partial sequence blastn 52940 968 0.994834710743802 Eukaryota Sar   Ciliophora Spirotrichea Euplotida Euplotidae Euplotes uncultured Euplotes sp.
9099265 9099265 PRJNA1044115_P_NODE_848_length_1590_cov_6.870138_g800_i0 PRJNA1044115 848 1590 6.870138 109.2351942 Spirostomum yagiui 1471042 SAR_Eukaryotes SAR_Eukaryotes 113 7.39e-20   NTclustered gi|2692944869|ref|NC_086648.1| 1471042 g800 i0 85.981 8.16415094339623 107 14 7 1 950 1055 3975 3869 Spirostomum yagiui isolate XKC mitochondrion, complete genome blastn 12981 113 1 Eukaryota Sar   Ciliophora Heterotrichea Heterotrichida Spirostomidae Spirostomum Spirostomum yagiui
13762199 13762199 PRJNA1044115_P_NODE_19471_length_330_cov_2.953307_g19287_i0 PRJNA1044115 19471 330 2.953307 9.7459131 root 1 Root_unresolved Root_unresolved 56.5 0.002   NTclustered gi|84997470|ref|XM_948364.1| 5874 g19287 i0 100 0.190909090909091 30 0 9 0 282 311 381 352 Theileria annulata uncharacterized protein (TA11355), partial mRNA blastn 63 56.5 1 Eukaryota Sar   Apicomplexa Aconoidasida Piroplasmida Theileriidae Theileria Theileria annulata
15036544 15036544 PRJNA1044115_P_NODE_43832_length_219_cov_17.000000_g43648_i0 PRJNA1044115 43832 219 17 37.23 Euplotes 5935 SAR_Eukaryotes SAR_Eukaryotes 405 1.29e-108   NTclustered gi|1333898193|gb|MG827339.1| 178273 g43648 i0 100 100.009132420091 219 0 100 0 1 219 161 379 Euplotes sp. strain SLS1 small subunit ribosomal RNA gene, partial sequence blastn 21902 405 1 Eukaryota Sar   Ciliophora Spirotrichea Euplotida Euplotidae Euplotes Euplotes sp.
18023396 18023396 PRJNA1044115_P_NODE_37075_length_248_cov_76.788571_g36891_i0 PRJNA1044115 37075 248 76.788571 190.43565608 Euplotes aediculatus 5940 SAR_Eukaryotes SAR_Eukaryotes 403 5.38e-108   NTclustered gi|6980030|gb|AF223571.1|AF223571 5940 g36891 i0 95.984 101.213709677419 249 9 100 1 1 248 3424 3176 Euplotes aediculatus internal transcribed spacer 1, 5.8S ribosomal RNA gene, internal transcribed spacer 2, and 28S ribosomal RNA gene, complete sequence blastn 25101 403 1 Eukaryota Sar   Ciliophora Spirotrichea Euplotida Euplotidae Euplotes Euplotes aediculatus
20572687 20572687 PRJNA1044115_P_NODE_3557_length_851_cov_762.863753_g3409_i0 PRJNA1044115 3557 851 762.863753 6491.97053803 Euplotes encysticus 440145 SAR_Eukaryotes SAR_Eukaryotes 1273 0   NTclustered gi|1233819925|gb|KX516617.1| 440145 g3409 i0 100 74.4112808460634 689 0 81 0 1 689 689 1 Euplotes encysticus isolate B555 large subunit ribosomal RNA gene, partial sequence blastn 63324 1273 1 Eukaryota Sar   Ciliophora Spirotrichea Euplotida Euplotidae Euplotes Euplotes encysticus
20572849 20572849 PRJNA1044115_P_NODE_997_length_1503_cov_36.783217_g939_i0 PRJNA1044115 997 1503 36.783217 552.85175151 Euplotes vanleeuwenhoeki 2794224 SAR_Eukaryotes SAR_Eukaryotes 425 7.89e-114   NTclustered gi|2055401904|ref|NC_056101.1| 2794224 g939 i0 77.068 13.3313373253493 798 146 77 30 527 1308 17756 18532 Euplotes vanleeuwenhoeki strain KKR18 mitochondrion, complete genome blastn 20037 425 1 Eukaryota Sar   Ciliophora Spirotrichea Euplotida Euplotidae Euplotes Euplotes vanleeuwenhoeki
24397216 24397216 PRJNA1044115_P_NODE_10660_length_461_cov_286.564433_g10476_i0 PRJNA1044115 10660 461 286.564433 1321.06203613 Euplotes aediculatus 5940 SAR_Eukaryotes SAR_Eukaryotes 490 7.999999999999998e-134   NTclustered gi|6980030|gb|AF223571.1|AF223571 5940 g10476 i0 91.008 39.590021691974 367 27 79 6 75 437 3581 3945 Euplotes aediculatus internal transcribed spacer 1, 5.8S ribosomal RNA gene, internal transcribed spacer 2, and 28S ribosomal RNA gene, complete sequence blastn 18251 490 1 Eukaryota Sar   Ciliophora Spirotrichea Euplotida Euplotidae Euplotes Euplotes aediculatus
24397226 24397226 PRJNA1044115_P_NODE_11380_length_444_cov_7.730458_g11196_i0 PRJNA1044115 11380 444 7.730458 34.32323352 Tetrahymena sp. KGE15 1200497 SAR_Eukaryotes SAR_Eukaryotes 808 0   NTclustered gi|523704203|emb|HE861887.1| 1200497 g11196 i0 99.549 85.213963963964 443 2 99 0 2 444 485 43 Tetrahymena sp. KGE15 partial 28S rRNA gene, strain KGE15 blastn 37835 808 1 Eukaryota Sar   Ciliophora Oligohymenophorea Hymenostomatida Tetrahymenidae Tetrahymena Tetrahymena sp. KGE15
24397519 24397519 PRJNA1044115_P_NODE_30840_length_265_cov_1.218750_g30656_i0 PRJNA1044115 30840 265 1.21875 3.2296875 Tetrahymena pigmentosa 5907 SAR_Eukaryotes SAR_Eukaryotes 387 5.85e-103   NTclustered gi|114329902|ref|NC_008339.1| 5907 g30656 i0 93.487 32.222641509434 261 15 98 1 1 261 1812 1554 Tetrahymena pigmentosa mitochondrion, complete genome blastn 8539 387 1 Eukaryota Sar   Ciliophora Oligohymenophorea Hymenostomatida Tetrahymenidae Tetrahymena Tetrahymena pigmentosa
25235038 25235038 PRJNA1044115_P_NODE_18900_length_335_cov_488.232824_g18716_i0 PRJNA1044115 18900 335 488.232824 1635.5799604 Euplotes 5935 SAR_Eukaryotes SAR_Eukaryotes 614 3.209999999999999e-171   NTclustered gi|1233819925|gb|KX516617.1| 440145 g18716 i0 99.701 99.7611940298507 335 1 100 0 1 335 672 1006 Euplotes encysticus isolate B555 large subunit ribosomal RNA gene, partial sequence blastn 33420 614 1 Eukaryota Sar   Ciliophora Spirotrichea Euplotida Euplotidae Euplotes Euplotes encysticus
27311886 27311886 PRJNA1044115_P_NODE_37903_length_247_cov_1.793103_g37719_i0 PRJNA1044115 37903 247 1.793103 4.42896441 root 1 Root_unresolved Root_unresolved 130 7.64e-36   NR CDW71769.1 5949 g37719 i0 93 2.58704453441296 71 5 86.2 0 33 245 1 71 CDW71769.1 transposase [Stylonychia lemnae] diamond 639 130 1 Eukaryota Sar   Ciliophora Spirotrichea Sporadotrichida Oxytrichidae Stylonychia Stylonychia lemnae
27351551 27351551 PRJNA1044115_P_NODE_36283_length_250_cov_0.881356_g36099_i0 PRJNA1044115 36283 250 0.881356 2.20339 Bacillariaceae sp. 3061772 SAR_Eukaryotes SAR_Eukaryotes 72 1.99e-12   NR KAL3916292.1 3061772 g36099 i0 46.5 1.032 86 41 97.2 1 2 244 103 188 KAL3916292.1 MAG: hypothetical protein SGILL_005242, partial [Bacillariaceae sp.] diamond 258 72 1 Eukaryota Sar   Bacillariophyta Bacillariophyceae Bacillariales Bacillariaceae   Bacillariaceae sp.
28108942 28108942 PRJNA1044115_P_NODE_13825_length_397_cov_4.104938_g13641_i0 PRJNA1044115 13825 397 4.104938 16.29660386 Euplotes aediculatus 5940 SAR_Eukaryotes SAR_Eukaryotes 92.8 1.95e-20   NR QTT61052.1 5940 g13641 i0 46.3 0.717884130982368 95 46 71.8 1 1 285 55 144 QTT61052.1 hypothetical protein [Euplotes aediculatus] diamond 285 92.8 1 Eukaryota Sar   Ciliophora Spirotrichea Euplotida Euplotidae Euplotes Euplotes aediculatus
28235160 28235160 PRJNA1044115_P_NODE_35326_length_251_cov_0.876404_g35142_i0 PRJNA1044115 35326 251 0.876404 2.19977404 Euplotes vanleeuwenhoeki 2794224 SAR_Eukaryotes SAR_Eukaryotes 132 1.68e-33   NR YP_010117025.1 2794224 g35142 i0 82.7 4.48207171314741 75 13 89.6 0 25 249 99 173 YP_010117025.1 Cytochrome c oxidase subunit 2 precursor [Euplotes vanleeuwenhoeki] diamond 1125 132 1 Eukaryota Sar   Ciliophora Spirotrichea Euplotida Euplotidae Euplotes Euplotes vanleeuwenhoeki
28416957 28416957 PRJNA1044115_P_NODE_19606_length_329_cov_2.687500_g19422_i0 PRJNA1044115 19606 329 2.6875 8.841875 Bigyra 2683628 SAR_Eukaryotes SAR_Eukaryotes 95.1 3.6e-23   NR AAG23688.1 42467 g19422 i0 68 2.73556231003039 75 24 68.4 0 67 291 1 75 AAG23688.1 ATP synthase F0 subunit 9 [Thraustochytrium aureum] diamond 900 95.9 0.991657977059437 Eukaryota Sar     Bigyra Thraustochytrida Thraustochytriidae Thraustochytrium Thraustochytrium aureum
28677563 28677563 PRJNA1044115_P_NODE_26047_length_286_cov_1.314554_g25863_i0 PRJNA1044115 26047 286 1.314554 3.75962444 Moneuplotes minuta 74792 SAR_Eukaryotes SAR_Eukaryotes 167 1.48e-47   NR ACX30945.1 74792 g25863 i0 89.4 1.97202797202797 94 10 98.6 0 3 284 35 128 ACX30945.1 cytochrome b [Moneuplotes minuta] diamond 564 167 1 Eukaryota Sar   Ciliophora Spirotrichea Euplotida Euplotidae Moneuplotes Moneuplotes minuta
28740597 28740597 PRJNA1044115_P_NODE_44147_length_202_cov_4.209302_g43963_i0 PRJNA1044115 44147 202 4.209302 8.50279004 Euplotes vannus 5939 SAR_Eukaryotes SAR_Eukaryotes 62.4 2.52e-9   NR QTT61064.1 5939 g43963 i0 77.5 0.594059405940594 40 9 59.4 0 83 202 392 431 QTT61064.1 hypothetical protein [Euplotes vannus] diamond 120 62.4 1 Eukaryota Sar   Ciliophora Spirotrichea Euplotida Euplotidae Euplotes Euplotes vannus
28898310 28898310 PRJNA1044115_P_NODE_36228_length_250_cov_0.881356_g36044_i0 PRJNA1044115 36228 250 0.881356 2.20339 Tetrahymena utriculariae 2486642 SAR_Eukaryotes SAR_Eukaryotes 70.9 5.29e-12   NR KAL4509228.1 2486642 g36044 i0 46.9 0.768 64 31 74.4 2 202 17 930 992 KAL4509228.1 hypothetical protein ABPG72_018159 [Tetrahymena utriculariae] diamond 192 70.9 1 Eukaryota Sar   Ciliophora Oligohymenophorea Hymenostomatida Tetrahymenidae Tetrahymena Tetrahymena utriculariae
30414705 30414705 PRJNA1044115_P_NODE_43973_length_211_cov_4.862319_g43789_i0 PRJNA1044115 43973 211 4.862319 10.25949309 Euplotes aediculatus 5940 SAR_Eukaryotes SAR_Eukaryotes 119 1.36e-33   NR QTT61051.1 5940 g43789 i0 92.4 0.938388625592417 66 5 93.8 0 211 14 10 75 QTT61051.1 ATPase subunit 9 [Euplotes aediculatus] diamond 198 119 1 Eukaryota Sar   Ciliophora Spirotrichea Euplotida Euplotidae Euplotes Euplotes aediculatus
30572133 30572133 PRJNA1044115_P_NODE_35293_length_251_cov_0.876404_g35109_i0 PRJNA1044115 35293 251 0.876404 2.19977404 Bacillariaceae sp. 3061772 SAR_Eukaryotes SAR_Eukaryotes 70.5 7.04e-12   NR KAL3924535.1 3061772 g35109 i0 41.5 1.93625498007968 82 47 96.8 1 1 243 644 725 KAL3924535.1 MAG: hypothetical protein SGILL_000986 [Bacillariaceae sp.] diamond 486 70.5 1 Eukaryota Sar   Bacillariophyta Bacillariophyceae Bacillariales Bacillariaceae   Bacillariaceae sp.

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;