RNAquarium Metadata Server
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contig_metadata

3 rows where bioproject = "PRJNA1044115", tax_clade = "Opisthokonta" and tax_phylum = "Porifera"

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tax_superkingdom 1

tax_phylum 1

  • Porifera · 3 ✖

tax_kingdom 1

tax_clade 1

  • Opisthokonta · 3 ✖

bioproject 1

  • PRJNA1044115 · 3 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
31203812 31203812 PRJNA1044115_P_NODE_26155_length_285_cov_2.169811_g25971_i0 PRJNA1044115 26155 285 2.169811 6.18396135 Acanthella acuta 85783 Porifera other_Eukaryota 53.5 1.01e-5   NR WRI02238.1 85783 g25971 i0 50.9 0.557894736842105 53 26 55.8 0 69 227 532 584 WRI02238.1 hypothetical protein [Acanthella acuta] diamond 159 53.5 1 Eukaryota Opisthokonta Metazoa Porifera Demospongiae Bubarida Dictyonellidae Acanthella Acanthella acuta
32311765 32311765 PRJNA1044115_P_NODE_20539_length_321_cov_6.564516_g20355_i0 PRJNA1044115 20539 321 6.564516 21.07209636 Acanthella acuta 85783 Porifera other_Eukaryota 53.9 1.17e-5   NR WRI02238.1 85783 g20355 i0 52.8 0.495327102803738 53 25 49.5 0 240 82 532 584 WRI02238.1 hypothetical protein [Acanthella acuta] diamond 159 53.9 1 Eukaryota Opisthokonta Metazoa Porifera Demospongiae Bubarida Dictyonellidae Acanthella Acanthella acuta
32690387 32690387 PRJNA1044115_P_NODE_41920_length_242_cov_0.923077_g41736_i0 PRJNA1044115 41920 242 0.923077 2.23384634 Dysidea avara 196820 Porifera other_Eukaryota 71.6 2.01e-12   NR XP_065898306.1 196820 g41736 i0 49.3 1.74793388429752 71 32 83.1 1 241 41 300 370 XP_065898306.1 thioredoxin domain-containing protein 5-like [Dysidea avara] diamond 423 71.6 1 Eukaryota Opisthokonta Metazoa Porifera Demospongiae Dictyoceratida Dysideidae Dysidea Dysidea avara

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;