contig_metadata
9 rows where bioproject = "PRJNA1041773", tax_phylum = "Thermoproteota" and tax_superkingdom = "Archaea"
This data as json, CSV (advanced)
| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1008402 | 1008402 | PRJNA1041773_P_NODE_38981_length_338_cov_4.018868_g38648_i0 | PRJNA1041773 | 38981 | 338 | 4.018868 | 13.58377384 | Metallosphaera | 41980 | Archaea | Archaea | 73.1 | 2.45e-8 | NTclustered | gi|676314532|gb|CP008822.1| | 43687 | g38648 | i0 | 85.915 | 4.22781065088757 | 71 | 6 | 29 | 3 | 40 | 107 | 1708064 | 1708133 | Metallosphaera sedula strain CuR1 genome | blastn | 1429 | 73.1 | 1 | Archaea | Thermoproteati | Thermoproteota | Thermoprotei | Sulfolobales | Sulfolobaceae | Metallosphaera | Metallosphaera sedula | ||
| 2720642 | 2720642 | PRJNA1041773_P_NODE_36263_length_350_cov_0.967509_g35930_i0 | PRJNA1041773 | 36263 | 350 | 0.967509 | 3.3862815 | Candidatus Methanosuratincola petrocarbonis (ex Vanwonterghem et al. 2016) | 1867261 | Archaea | Archaea | 311 | 4.94e-80 | NTclustered | gi|2551788334|gb|CP130488.1| | 1867261 | g35930 | i0 | 94.118 | 0.925714285714286 | 204 | 12 | 93 | 0 | 147 | 350 | 411003 | 411206 | MAG: Candidatus Methanosuratincola petrocarbonis isolate LWZ-6 chromosome, complete genome | blastn | 324 | 311 | 1 | Archaea | Thermoproteati | Thermoproteota | Methanosuratincolia | Candidatus Methanomethylicales | Candidatus Methanomethylicaceae | Candidatus Methanosuratincola (ex Vanwonterghem et al. 2016) | Candidatus Methanosuratincola petrocarbonis (ex Vanwonterghem et al. 2016) | ||
| 5272687 | 5272687 | PRJNA1041773_P_NODE_10445_length_637_cov_75.845745_g10121_i0 | PRJNA1041773 | 10445 | 637 | 75.845745 | 483.13739565 | Infirmifilum sp. NZ | 2926850 | Archaea | Archaea | 169 | 6.02e-37 | NTclustered | gi|2211485873|gb|CP094288.1| | 2926850 | g10121 | i0 | 87.671 | 33.9058084772371 | 146 | 17 | 30 | 1 | 89 | 233 | 909863 | 909718 | Infirmifilum sp. NZ chromosome | blastn | 21598 | 169 | 1 | Archaea | Thermoproteati | Thermoproteota | Thermoprotei | Thermofilales | Thermofilaceae | Infirmifilum | Infirmifilum sp. NZ | ||
| 26591756 | 26591756 | PRJNA1041773_P_NODE_58501_length_283_cov_0.957143_g58168_i0 | PRJNA1041773 | 58501 | 283 | 0.957143 | 2.70871469 | Thermoprotei archaeon | 2250277 | Archaea | Archaea | 93.2 | 3.43e-22 | NR | RLE90483.1 | 2250277 | g58168 | i0 | 77.2 | 0.604240282685512 | 57 | 13 | 60.4 | 0 | 242 | 72 | 1 | 57 | RLE90483.1 MAG: hypothetical protein DRJ55_06930 [Thermoprotei archaeon] | diamond | 171 | 93.2 | 1 | Archaea | Thermoproteati | Thermoproteota | Thermoprotei | Thermoprotei archaeon | |||||
| 28361578 | 28361578 | PRJNA1041773_P_NODE_52066_length_297_cov_1.294643_g51733_i0 | PRJNA1041773 | 52066 | 297 | 1.294643 | 3.84508971 | Ignisphaera sp. | 2268142 | Archaea | Archaea | 61.6 | 1.65e-8 | NR | MCI4437815.1 | 2268142 | g51733 | i0 | 32 | 0.97979797979798 | 97 | 65 | 97 | 1 | 296 | 9 | 577 | 673 | MCI4437815.1 hypothetical protein [Ignisphaera sp.] | diamond | 291 | 61.6 | 1 | Archaea | Thermoproteati | Thermoproteota | Thermoprotei | Desulfurococcales | Desulfurococcaceae | Ignisphaera | Ignisphaera sp. | ||
| 29813980 | 29813980 | PRJNA1041773_P_NODE_40411_length_333_cov_1.776923_g40078_i0 | PRJNA1041773 | 40411 | 333 | 1.776923 | 5.91715359 | Ignisphaera sp. | 2268142 | Archaea | Archaea | 61.6 | 3.22e-9 | NR | MCI4437302.1 | 2268142 | g40078 | i0 | 40.2 | 0.738738738738739 | 82 | 47 | 73 | 2 | 83 | 325 | 15 | 95 | MCI4437302.1 hypothetical protein [Ignisphaera sp.] | diamond | 246 | 61.6 | 1 | Archaea | Thermoproteati | Thermoproteota | Thermoprotei | Desulfurococcales | Desulfurococcaceae | Ignisphaera | Ignisphaera sp. | ||
| 30540718 | 30540718 | PRJNA1041773_P_NODE_61233_length_277_cov_2.264706_g60900_i0 | PRJNA1041773 | 61233 | 277 | 2.264706 | 6.27323562 | Ignisphaera sp. | 2268142 | Archaea | Archaea | 89.7 | 1.64e-18 | NR | MCI4436154.1 | 2268142 | g60900 | i0 | 48.9 | 0.974729241877256 | 90 | 46 | 97.5 | 0 | 3 | 272 | 244 | 333 | MCI4436154.1 adenosylcobalamin-dependent ribonucleoside-diphosphate reductase [Ignisphaera sp.] | diamond | 270 | 89.7 | 1 | Archaea | Thermoproteati | Thermoproteota | Thermoprotei | Desulfurococcales | Desulfurococcaceae | Ignisphaera | Ignisphaera sp. | ||
| 32184975 | 32184975 | PRJNA1041773_P_NODE_74258_length_255_cov_1.692308_g73925_i0 | PRJNA1041773 | 74258 | 255 | 1.692308 | 4.3153854 | Thermoproteota archaeon | 2056631 | Archaea | Archaea | 164 | 4.399999999999998e-47 | NR | MDP8887685.1 | 2056631 | g73925 | i0 | 98.8 | 0.988235294117647 | 84 | 1 | 98.8 | 0 | 254 | 3 | 297 | 380 | MDP8887685.1 cysteine desulfurase [Thermoproteota archaeon] | diamond | 252 | 164 | 1 | Archaea | Thermoproteati | Thermoproteota | Thermoproteota archaeon | ||||||
| 32847907 | 32847907 | PRJNA1041773_P_NODE_15500_length_526_cov_2.947020_g15171_i0 | PRJNA1041773 | 15500 | 526 | 2.94702 | 15.5013252 | Candidatus Methanomethylicaceae archaeon | 2282146 | Archaea | Archaea | 329 | 1.87e-108 | NR | MEM3434087.1 | 2282146 | g15171 | i0 | 88.6 | 0.998098859315589 | 175 | 20 | 99.8 | 0 | 1 | 525 | 148 | 322 | MEM3434087.1 peptide ABC transporter substrate-binding protein [Candidatus Methanomethyliaceae archaeon] | diamond | 525 | 329 | 1 | Archaea | Thermoproteati | Thermoproteota | Methanosuratincolia | Candidatus Methanomethylicales | Candidatus Methanomethylicaceae | Candidatus Methanomethylicaceae archaeon |
Advanced export
JSON shape: default, array, newline-delimited
CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;