contig_metadata
9 rows where bioproject = "PRJNA1041773" and tax_phylum = "Thermodesulfobacteriota"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 170698 | 170698 | PRJNA1041773_P_NODE_68801_length_264_cov_1.612565_g68468_i0 | PRJNA1041773 | 68801 | 264 | 1.612565 | 4.2571716 | Geobacter sp. DSM 9736 | 1277350 | Bacteria | Bacteria | 84.2 | 8.55e-12 | NTclustered | gi|1210070030|emb|LT896716.1| | 1277350 | g68468 | i0 | 90.476 | 12.6818181818182 | 63 | 6 | 24 | 0 | 196 | 258 | 2106368 | 2106430 | Geobacter sp. DSM 9736 genome assembly, chromosome: I | blastn | 3348 | 84.2 | 1 | Bacteria | Pseudomonadati | Thermodesulfobacteriota | Desulfuromonadia | Geobacterales | Geobacteraceae | Geobacter | Geobacter sp. DSM 9736 | ||
| 3559376 | 3559376 | PRJNA1041773_P_NODE_85803_length_247_cov_2.195402_g85470_i0 | PRJNA1041773 | 85803 | 247 | 2.195402 | 5.42264294 | Pseudomonadati | 3379134 | Bacteria | Bacteria | 383 | 6.97e-102 | NTclustered | gi|2045533567|gb|CP074693.1| | 35554 | g85470 | i0 | 94.737 | 69.2429149797571 | 247 | 11 | 100 | 1 | 1 | 247 | 84074 | 83830 | Geobacter sulfurreducens strain YM35 chromosome, complete genome | blastn | 17103 | 385 | 0.994805194805195 | Bacteria | Pseudomonadati | Thermodesulfobacteriota | Desulfuromonadia | Geobacterales | Geobacteraceae | Geobacter | Geobacter sulfurreducens | ||
| 12924771 | 12924771 | PRJNA1041773_P_NODE_93751_length_244_cov_0.900585_g93418_i0 | PRJNA1041773 | 93751 | 244 | 0.900585 | 2.1974274 | Desulfosarcina ovata | 83564 | Bacteria | Bacteria | 84.2 | 7.8e-12 | NTclustered | gi|1774952549|dbj|AP021879.1| | 2752305 | g93418 | i0 | 94.444 | 0.221311475409836 | 54 | 3 | 22 | 0 | 1 | 54 | 7167771 | 7167718 | Desulfosarcina ovata subsp. ovata oXyS1 DNA, complete genome | blastn | 54 | 84.2 | 1 | Bacteria | Pseudomonadati | Thermodesulfobacteriota | Desulfobacteria | Desulfobacterales | Desulfosarcinaceae | Desulfosarcina | Desulfosarcina ovata | ||
| 13762129 | 13762129 | PRJNA1041773_P_NODE_89251_length_246_cov_0.890173_g88918_i0 | PRJNA1041773 | 89251 | 246 | 0.890173 | 2.18982558 | Desulfovibrio | 872 | Bacteria | Bacteria | 342 | 1.1799999999999997e-89 | NTclustered | gi|1894914451|emb|LT984798.1| | 631220 | g88918 | i0 | 91.87 | 4 | 246 | 18 | 99 | 2 | 2 | 246 | 2678503 | 2678259 | Desulfovibrio sp. G11 isolate G11PacBio genome assembly, chromosome: 1 | blastn | 984 | 342 | 1 | Bacteria | Pseudomonadati | Thermodesulfobacteriota | Desulfovibrionia | Desulfovibrionales | Desulfovibrionaceae | Desulfovibrio | Desulfovibrio sp. G11 | ||
| 27540858 | 27540858 | PRJNA1041773_P_NODE_69844_length_262_cov_2.312169_g69511_i0 | PRJNA1041773 | 69844 | 262 | 2.312169 | 6.05788278 | Geobacter sp. FeAm | 46610 | Bacteria | Bacteria | 155 | 8.39e-42 | NR | WP_149210579.1 | 2597769 | g69511 | i0 | 79.3 | 0.99618320610687 | 87 | 18 | 99.6 | 0 | 1 | 261 | 221 | 307 | WP_149210579.1 ATP-binding protein [Geobacter sp. FeAm09] | diamond | 261 | 155 | 1 | Bacteria | Pseudomonadati | Thermodesulfobacteriota | Desulfuromonadia | Geobacterales | Geobacteraceae | Geobacter | Geobacter sp. FeAm09 | ||
| 27825071 | 27825071 | PRJNA1041773_P_NODE_46144_length_313_cov_3.516667_g45811_i0 | PRJNA1041773 | 46144 | 313 | 3.516667 | 11.00716771 | Desulfovibrio inopinatus | 102109 | Bacteria | Bacteria | 88.2 | 9.43e-18 | NR | WP_169727937.1 | 102109 | g45811 | i0 | 46.3 | 0.910543130990415 | 95 | 50 | 90.1 | 1 | 312 | 31 | 329 | 423 | WP_169727937.1 glycosyltransferase family 9 protein [Desulfovibrio inopinatus] | diamond | 285 | 88.2 | 1 | Bacteria | Pseudomonadati | Thermodesulfobacteriota | Desulfovibrionia | Desulfovibrionales | Desulfovibrionaceae | Desulfovibrio | Desulfovibrio inopinatus | ||
| 29877390 | 29877390 | PRJNA1041773_P_NODE_105731_length_226_cov_2.183007_g105398_i0 | PRJNA1041773 | 105731 | 226 | 2.183007 | 4.93359582 | Desulfobulbus sp. Tol-SR | 1536652 | Bacteria | Bacteria | 54.3 | 2.44e-6 | NR | KGO33050.1 | 1536652 | g105398 | i0 | 38 | 1.65929203539823 | 71 | 43 | 92.9 | 1 | 8 | 217 | 80 | 150 | KGO33050.1 hypothetical protein JT06_16820, partial [Desulfobulbus sp. Tol-SR] | diamond | 375 | 54.3 | 1 | Bacteria | Pseudomonadati | Thermodesulfobacteriota | Desulfobulbia | Desulfobulbales | Desulfobulbaceae | Desulfobulbus | Desulfobulbus sp. Tol-SR | ||
| 31575881 | 31575881 | PRJNA1041773_P_NODE_87296_length_247_cov_0.885057_g86963_i0 | PRJNA1041773 | 87296 | 247 | 0.885057 | 2.18609079 | Syntrophorhabdus | 513557 | Bacteria | Bacteria | 96.3 | 4.7500000000000005e-21 | NR | OPX93278.1 | 1811699 | g86963 | i0 | 94 | 4.8582995951417 | 50 | 3 | 60.7 | 0 | 247 | 98 | 450 | 499 | OPX93278.1 MAG: Elongation factor G [Syntrophorhabdus sp. PtaB.Bin027] | diamond | 1200 | 96.3 | 1 | Bacteria | Pseudomonadati | Thermodesulfobacteriota | Syntrophorhabdia | Syntrophorhabdales | Syntrophorhabdaceae | Syntrophorhabdus | Syntrophorhabdus sp. PtaB.Bin027 | ||
| 32177020 | 32177020 | PRJNA1041773_P_NODE_68498_length_264_cov_3.769634_g68165_i0 | PRJNA1041773 | 68498 | 264 | 3.769634 | 9.95183376 | Desulfovibrio | 872 | Bacteria | Bacteria | 44.7 | 0.00996 | NR | WP_169727937.1 | 102109 | g68165 | i0 | 37.9 | 1.81818181818182 | 87 | 43 | 96.6 | 3 | 256 | 2 | 262 | 339 | WP_169727937.1 glycosyltransferase family 9 protein [Desulfovibrio inopinatus] | diamond | 480 | 44.7 | 1 | Bacteria | Pseudomonadati | Thermodesulfobacteriota | Desulfovibrionia | Desulfovibrionales | Desulfovibrionaceae | Desulfovibrio | Desulfovibrio inopinatus |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;