contig_metadata
8 rows where bioproject = "PRJNA1041773", tax_phylum = "Spirochaetota" and tax_superkingdom = "Bacteria"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1444847 | 1444847 | PRJNA1041773_P_NODE_33842_length_361_cov_0.711806_g33509_i0 | PRJNA1041773 | 33842 | 361 | 0.711806 | 2.56961966 | Brachyspira murdochii | 84378 | Bacteria | Bacteria | 52.8 | 0.034 | NTclustered | gi|296016874|gb|CP001959.1| | 526224 | g33509 | i0 | 100 | 0.155124653739612 | 28 | 0 | 8 | 0 | 332 | 359 | 1506209 | 1506236 | Brachyspira murdochii DSM 12563, complete genome | blastn | 56 | 52.8 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Brachyspirales | Brachyspiraceae | Brachyspira | Brachyspira murdochii | ||
| 6548704 | 6548704 | PRJNA1041773_P_NODE_67586_length_266_cov_1.595855_g67253_i0 | PRJNA1041773 | 67586 | 266 | 1.595855 | 4.2449743 | Pseudomonadati | 3379134 | Bacteria | Bacteria | 89 | 2.78e-20 | NR | NMC67714.1 | 2026792 | g67253 | i0 | 69.8 | 2.36842105263158 | 53 | 16 | 59.8 | 0 | 262 | 104 | 88 | 140 | NMC67714.1 WxcM-like domain-containing protein [Spirochaetales bacterium] | diamond | 630 | 89.7 | 0.992196209587514 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Spirochaetales | Spirochaetales bacterium | ||||
| 27572317 | 27572317 | PRJNA1041773_P_NODE_97444_length_242_cov_2.005917_g97111_i0 | PRJNA1041773 | 97444 | 242 | 2.005917 | 4.85431914 | Rectinema sp. | 1937017 | Bacteria | Bacteria | 157 | 4.98e-46 | NR | MCX8013823.1 | 1937017 | g97111 | i0 | 100 | 4.94628099173554 | 80 | 0 | 99.2 | 0 | 241 | 2 | 86 | 165 | MCX8013823.1 TraB/VirB10 family protein [Rectinema sp.] | diamond | 1197 | 157 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Spirochaetales | Rectinemataceae | Rectinema | Rectinema sp. | ||
| 27698985 | 27698985 | PRJNA1041773_P_NODE_78064_length_251_cov_0.865169_g77731_i0 | PRJNA1041773 | 78064 | 251 | 0.865169 | 2.17157419 | spirochete symbiont of Stewartia floridana | 1968597 | Bacteria | Bacteria | 61.6 | 2.47e-10 | NR | RLW70585.1 | 1968597 | g77731 | i0 | 81.8 | 0.394422310756972 | 33 | 6 | 39.4 | 0 | 112 | 14 | 18 | 50 | RLW70585.1 MAG: hypothetical protein B6D68_00645, partial [spirochete symbiont of Stewartia floridana] | diamond | 99 | 61.6 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Spirochaetales | spirochete symbiont of Stewartia floridana | ||||
| 27880052 | 27880052 | PRJNA1041773_P_NODE_56245_length_287_cov_1.696262_g55912_i0 | PRJNA1041773 | 56245 | 287 | 1.696262 | 4.86827194 | Bacteria | 2 | Bacteria | Bacteria | 84.7 | 9.15e-17 | NR | HQI19057.1 | 2026757 | g55912 | i0 | 43.5 | 3.55400696864112 | 85 | 48 | 88.9 | 0 | 32 | 286 | 193 | 277 | HQI19057.1 cbb3-type cytochrome c oxidase subunit I [Leptospiraceae bacterium] | diamond | 1020 | 84.7 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Leptospirales | Leptospiraceae | Leptospiraceae bacterium | |||
| 28266753 | 28266753 | PRJNA1041773_P_NODE_88086_length_246_cov_1.878613_g87753_i0 | PRJNA1041773 | 88086 | 246 | 1.878613 | 4.62138798 | Spirochaetia bacterium | 2053615 | Bacteria | Bacteria | 108 | 8.360000000000001e-29 | NR | MFO7729640.1 | 2053615 | g87753 | i0 | 91.5 | 0.719512195121951 | 59 | 3 | 72 | 1 | 68 | 244 | 8 | 64 | MFO7729640.1 hypothetical protein [Spirochaetia bacterium] | diamond | 177 | 108 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Spirochaetia bacterium | |||||
| 30035302 | 30035302 | PRJNA1041773_P_NODE_84491_length_248_cov_0.880000_g84158_i0 | PRJNA1041773 | 84491 | 248 | 0.88 | 2.1824 | spirochete symbiont of Stewartia floridana | 1968597 | Bacteria | Bacteria | 67.4 | 1.25e-12 | NR | RLW70585.1 | 1968597 | g84158 | i0 | 90.6 | 0.387096774193548 | 32 | 3 | 38.7 | 0 | 139 | 44 | 18 | 49 | RLW70585.1 MAG: hypothetical protein B6D68_00645, partial [spirochete symbiont of Stewartia floridana] | diamond | 96 | 67.4 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Spirochaetales | spirochete symbiont of Stewartia floridana | ||||
| 30438187 | 30438187 | PRJNA1041773_P_NODE_89533_length_246_cov_0.890173_g89200_i0 | PRJNA1041773 | 89533 | 246 | 0.890173 | 2.18982558 | Pseudomonadati | 3379134 | Bacteria | Bacteria | 60.8 | 4.61e-10 | NR | RLW70585.1 | 1968597 | g89200 | i0 | 77.4 | 0.768292682926829 | 31 | 7 | 37.8 | 0 | 5 | 97 | 1 | 31 | RLW70585.1 MAG: hypothetical protein B6D68_00645, partial [spirochete symbiont of Stewartia floridana] | diamond | 189 | 60.8 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Spirochaetales | spirochete symbiont of Stewartia floridana |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;