RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

2 rows where bioproject = "PRJNA1041773" and tax_phylum = "Fidelibacterota"

✎ View and edit SQL

This data as json, CSV (advanced)

tax_superkingdom 1

tax_phylum 1

  • Fidelibacterota · 2 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA1041773 · 2 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
30509168 30509168 PRJNA1041773_P_NODE_89313_length_246_cov_0.890173_g88980_i0 PRJNA1041773 89313 246 0.890173 2.18982558 Fidelibacterota bacterium 2026760 Bacteria Bacteria 154 3.2199999999999987e-41   NR MEL1226727.1 2026760 g88980 i0 90.2 1 82 8 100 0 1 246 778 859 MEL1226727.1 TonB-dependent receptor [Fidelibacterota bacterium] diamond 246 154 1 Bacteria FCB group Pseudomonadati Fidelibacterota         Fidelibacterota bacterium
32153285 32153285 PRJNA1041773_P_NODE_105318_length_227_cov_2.857143_g104985_i0 PRJNA1041773 105318 227 2.857143 6.48571461 Fidelibacterota bacterium 2026760 Bacteria Bacteria 44.3 0.00885   NR MBT5268102.1 2026760 g104985 i0 45.6 1.51982378854626 57 26 74 2 220 53 982 1034 MBT5268102.1 hypothetical protein [Fidelibacterota bacterium] diamond 345 44.3 1 Bacteria FCB group Pseudomonadati Fidelibacterota         Fidelibacterota bacterium

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;