RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

18 rows where bioproject = "PRJNA1041773" and tax_phylum = "Annelida"

✎ View and edit SQL

This data as json, CSV (advanced)

analysis 2

tax_superkingdom 1

tax_phylum 1

  • Annelida · 18 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA1041773 · 18 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
7822647 7822647 PRJNA1041773_P_NODE_22527_length_438_cov_1.131507_g22196_i0 PRJNA1041773 22527 438 1.131507 4.95600066 Loimia sp. RM-2022 2927651 Annelida Annelida 65.8 5.44e-6   NTclustered gi|2209439381|gb|ON017366.1| 2927651 g22196 i0 97.368 0.0867579908675799 38 1 9 0 7 44 59 22 Loimia sp. RM-2022 isolate R5 small subunit ribosomal RNA gene, partial sequence blastn 38 65.8 1 Eukaryota Opisthokonta Metazoa Annelida Polychaeta Terebellida Terebellidae Loimia Loimia sp. RM-2022
13761782 13761782 PRJNA1041773_P_NODE_36671_length_348_cov_1.640000_g36338_i0 PRJNA1041773 36671 348 1.64 5.7072 Aglaophamus 311529 Annelida Annelida 534 2.679999999999999e-147   NTclustered gi|289470457|gb|GU179386.1| 329459 g36338 i0 94.302 81.3362068965517 351 16 100 3 1 348 795 446 Aglaophamus malmgreni voucher MB36000133 28S ribosomal RNA gene, partial sequence blastn 28305 534 1 Eukaryota Opisthokonta Metazoa Annelida Polychaeta Phyllodocida Nephtyidae Aglaophamus Aglaophamus malmgreni
18022909 18022909 PRJNA1041773_P_NODE_92655_length_244_cov_2.491228_g92322_i0 PRJNA1041773 92655 244 2.491228 6.07859632 Aglaophamus circinata 397538 Annelida Annelida 440 4.019999999999999e-119   NTclustered gi|111559285|gb|DQ790020.1| 397538 g92322 i0 99.18 99.6147540983606 244 2 100 0 1 244 2210 2453 Aglaophamus circinata 28S large subunit ribosomal RNA gene, partial sequence blastn 24306 440 1 Eukaryota Opisthokonta Metazoa Annelida Polychaeta Phyllodocida Nephtyidae Aglaophamus Aglaophamus circinata
19296714 19296714 PRJNA1041773_P_NODE_83136_length_249_cov_0.875000_g82803_i0 PRJNA1041773 83136 249 0.875 2.17875 Ailoscolex lacteospumosus 1046305 Annelida Annelida 56.5 0.002   NTclustered gi|2920003527|emb|OZ238867.1| 1046305 g82803 i0 89.362 0.301204819277108 47 2 18 3 48 91 25213103 25213149 Ailoscolex lacteospumosus genome assembly, chromosome: 8 blastn 75 56.5 1 Eukaryota Opisthokonta Metazoa Annelida Clitellata Crassiclitellata Ailoscolecidae Ailoscolex Ailoscolex lacteospumosus
26710294 26710294 PRJNA1041773_P_NODE_61641_length_277_cov_0.774510_g61308_i0 PRJNA1041773 61641 277 0.77451 2.1453927 root 1 Root_unresolved Root_unresolved 63.5 2.31e-9   NR KAK2170054.1 27915 g61308 i0 42.9 0.996389891696751 56 32 60.6 0 51 218 163 218 KAK2170054.1 hypothetical protein NP493_1165g00046 [Ridgeia piscesae] diamond 276 63.5 1 Eukaryota Opisthokonta Metazoa Annelida Polychaeta Sabellida Siboglinidae Ridgeia Ridgeia piscesae
26749905 26749905 PRJNA1041773_P_NODE_84421_length_248_cov_0.880000_g84088_i0 PRJNA1041773 84421 248 0.88 2.1824 Lamellibrachia satsuma 104711 Annelida Annelida 41.2 0.0471   NR KAI0223263.1 104711 g84088 i0 70.4 0.326612903225806 27 8 32.7 0 188 108 77 103 KAI0223263.1 hypothetical protein LSAT2_025534, partial [Lamellibrachia satsuma] diamond 81 41.2 1 Eukaryota Opisthokonta Metazoa Annelida Polychaeta Sabellida Siboglinidae Lamellibrachia Lamellibrachia satsuma
26845553 26845553 PRJNA1041773_P_NODE_100621_length_241_cov_0.916667_g100288_i0 PRJNA1041773 100621 241 0.916667 2.20916747 Owenia fusiformis 6347 Annelida Annelida 50.4 6.67e-5   NR CAH1786753.1 6347 g100288 i0 47.8 0.572614107883817 46 24 57.3 0 239 102 413 458 CAH1786753.1 unnamed protein product, partial [Owenia fusiformis] diamond 138 50.4 1 Eukaryota Opisthokonta Metazoa Annelida Polychaeta Sabellida Oweniidae Owenia Owenia fusiformis
27121671 27121671 PRJNA1041773_P_NODE_32262_length_369_cov_1.287162_g31930_i0 PRJNA1041773 32262 369 1.287162 4.74962778 root 1 Root_unresolved Root_unresolved 47.8 0.00236   NR KAK2154599.1 27915 g31930 i0 71.4 6.36585365853659 28 8 22.8 0 139 56 29 56 KAK2154599.1 hypothetical protein NP493_2167g00018 [Ridgeia piscesae] diamond 2349 48.1 0.993762993762994 Eukaryota Opisthokonta Metazoa Annelida Polychaeta Sabellida Siboglinidae Ridgeia Ridgeia piscesae
27446315 27446315 PRJNA1041773_P_NODE_94583_length_244_cov_0.900585_g94250_i0 PRJNA1041773 94583 244 0.900585 2.1974274 Lamellibrachia satsuma 104711 Annelida Annelida 51.6 2.64e-5   NR KAI0232794.1 104711 g94250 i0 67.6 0.418032786885246 34 11 41.8 0 212 111 291 324 KAI0232794.1 GDP-fucose protein O-fucosyltransferase 1 [Lamellibrachia satsuma] diamond 102 51.6 1 Eukaryota Opisthokonta Metazoa Annelida Polychaeta Sabellida Siboglinidae Lamellibrachia Lamellibrachia satsuma
28077421 28077421 PRJNA1041773_P_NODE_78285_length_251_cov_0.865169_g77952_i0 PRJNA1041773 78285 251 0.865169 2.17157419 Lamellibrachia satsuma 104711 Annelida Annelida 76.3 2.08e-15   NR KAI0229585.1 104711 g77952 i0 72.7 4.20717131474104 44 12 52.6 0 132 1 67 110 KAI0229585.1 hypothetical protein LSAT2_019978, partial [Lamellibrachia satsuma] diamond 1056 76.3 1 Eukaryota Opisthokonta Metazoa Annelida Polychaeta Sabellida Siboglinidae Lamellibrachia Lamellibrachia satsuma
28298464 28298464 PRJNA1041773_P_NODE_52926_length_295_cov_0.851351_g52593_i0 PRJNA1041773 52926 295 0.851351 2.51148545 Capitella teleta 283909 Annelida Annelida 49.7 2.17e-4   NR ELU04211.1 283909 g52593 i0 44.4 0.549152542372881 54 30 54.9 0 163 2 224 277 ELU04211.1 hypothetical protein CAPTEDRAFT_121441 [Capitella teleta] diamond 162 49.7 1 Eukaryota Opisthokonta Metazoa Annelida Polychaeta   Capitellidae Capitella Capitella teleta
28930046 28930046 PRJNA1041773_P_NODE_101728_length_241_cov_0.916667_g101395_i0 PRJNA1041773 101728 241 0.916667 2.20916747 Paralvinella palmiformis 53620 Annelida Annelida 58.5 1.01e-7   NR KAK2156034.1 53620 g101395 i0 73.3 0.37344398340249 30 8 37.3 0 89 178 311 340 KAK2156034.1 hypothetical protein LSH36_223g01066 [Paralvinella palmiformis] diamond 90 58.5 1 Eukaryota Opisthokonta Metazoa Annelida Polychaeta Terebellida Alvinellidae Paralvinella Paralvinella palmiformis
30193096 30193096 PRJNA1041773_P_NODE_77832_length_251_cov_0.865169_g77499_i0 PRJNA1041773 77832 251 0.865169 2.17157419 Capitella teleta 283909 Annelida Annelida 65.9 2.75e-10   NR ELU04210.1 283909 g77499 i0 43.9 0.9800796812749 82 46 98 0 6 251 116 197 ELU04210.1 hypothetical protein CAPTEDRAFT_203582 [Capitella teleta] diamond 246 65.9 1 Eukaryota Opisthokonta Metazoa Annelida Polychaeta   Capitellidae Capitella Capitella teleta
31259497 31259497 PRJNA1041773_P_NODE_47735_length_309_cov_1.084746_g47402_i0 PRJNA1041773 47735 309 1.084746 3.35186514 Metazoa 33208 Annelida Annelida 114 5.9000000000000005e-27   NR KAI0217658.1 104711 g47402 i0 53.8 5.81553398058252 91 42 88.3 0 275 3 721 811 KAI0217658.1 hypothetical protein LSAT2_030614, partial [Lamellibrachia satsuma] diamond 1797 114 1 Eukaryota Opisthokonta Metazoa Annelida Polychaeta Sabellida Siboglinidae Lamellibrachia Lamellibrachia satsuma
31575880 31575880 PRJNA1041773_P_NODE_75036_length_254_cov_1.640884_g74703_i0 PRJNA1041773 75036 254 1.640884 4.16784536 Metazoa 33208 Annelida Annelida 107 5.61e-25   NR KAI0217658.1 104711 g74703 i0 57.8 2.74015748031496 83 35 98 0 5 253 722 804 KAI0217658.1 hypothetical protein LSAT2_030614, partial [Lamellibrachia satsuma] diamond 696 107 1 Eukaryota Opisthokonta Metazoa Annelida Polychaeta Sabellida Siboglinidae Lamellibrachia Lamellibrachia satsuma
31607405 31607405 PRJNA1041773_P_NODE_70256_length_262_cov_0.994709_g69923_i0 PRJNA1041773 70256 262 0.994709 2.60613758 Metazoa 33208 Annelida Annelida 63.9 1.67e-9   NR KAI0217658.1 104711 g69923 i0 53.3 2.06106870229008 60 24 68.7 2 2 181 919 974 KAI0217658.1 hypothetical protein LSAT2_030614, partial [Lamellibrachia satsuma] diamond 540 63.9 1 Eukaryota Opisthokonta Metazoa Annelida Polychaeta Sabellida Siboglinidae Lamellibrachia Lamellibrachia satsuma
31805151 31805151 PRJNA1041773_P_NODE_101497_length_241_cov_0.916667_g101164_i0 PRJNA1041773 101497 241 0.916667 2.20916747 Lamellibrachia satsuma 104711 Annelida Annelida 67.4 5.34e-12   NR KAI0229585.1 104711 g101164 i0 63 1.14522821576763 46 17 57.3 0 103 240 65 110 KAI0229585.1 hypothetical protein LSAT2_019978, partial [Lamellibrachia satsuma] diamond 276 67.4 1 Eukaryota Opisthokonta Metazoa Annelida Polychaeta Sabellida Siboglinidae Lamellibrachia Lamellibrachia satsuma
31995055 31995055 PRJNA1041773_P_NODE_51038_length_300_cov_0.859031_g50705_i0 PRJNA1041773 51038 300 0.859031 2.577093 Capitella teleta 283909 Annelida Annelida 49.7 1.92e-4   NR ELU13791.1 283909 g50705 i0 34.9 0.86 86 56 86 0 294 37 133 218 ELU13791.1 hypothetical protein CAPTEDRAFT_213860 [Capitella teleta] diamond 258 49.7 1 Eukaryota Opisthokonta Metazoa Annelida Polychaeta   Capitellidae Capitella Capitella teleta

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;